Hello list,
I'm having trouble compiling octave-forge. All the dependencies compile
fine, but a segmentation fault occurs while compiling the octave-forge
package. I have performed the recommended "fink selfupdate" and tried
reinstalling octave-forge but the segmentation fault still occurs.
A copy of the terminal output is provided below.
Thanks,
Phil
bertrand:~ wjgoh$ sudo fink -y install octave-forge
Information about 6640 packages read in 1 seconds.
The following package will be installed or updated:
octave-forge
Setting runtime build-lock...
dpkg-deb -b
/sw/src/fink.build/root-fink-buildlock-octave-forge-20070821-1004
/sw/src/fink.build
dpkg-deb: building package `fink-buildlock-octave-forge-20070821-1004' in
`/sw/src/fink.build/fink-buildlock-octave-forge-20070821-1004_2007.12.03-
18.46.36_darwin-i386.deb'.
Installing build-lock package...
/sw/bin/dpkg-lockwait -i
/sw/src/fink.build/fink-buildlock-octave-forge-20070821-1004_2007.12.03-
18.46.36_darwin-i386.deb
Selecting previously deselected package
fink-buildlock-octave-forge-20070821-1004.
(Reading database ... 62944 files and directories currently installed.)
Unpacking fink-buildlock-octave-forge-20070821-1004 (from
.../fink-buildlock-octave-forge-20070821-1004_2007.12.03-
18.46.36_darwin-i386.deb) ...
Setting up fink-buildlock-octave-forge-20070821-1004 (2007.12.03-18.46.36)
...
gzip -dc /sw/src/octave-forge-bundle-20070821.tar.gz | /sw/bin/tar -xf -
--no-same-owner --no-same-permissions
/var/tmp/tmp.1.aqhUeX
#!/bin/sh -ev
cd main
tar -zxf optiminterp-0.2.3.tar.gz
rm optiminterp-0.2.3.tar.gz
# the underscore turns F77_FUNC in disarray, and if using F77_FUNC_
instead,
# there are other occurences of the symbol that would need an appended
underscore..
perl -pi -e 's,optiminterp_wrapper,optiminterpwrapper,;
s,OPTIMINTERP_WRAPPER,OPTIMINTERPWRAPPER,' optiminterp-0.2.3
/src/optiminterp*
tar -zcf optiminterp-0.2.3.tar.gz optiminterp-0.2.3
rm -fR optiminterp-0.2.3
# "Ginac library or headers not found" _ skip this
rm symbolic-*
cd -
rm extra/{java,jhandles,xraylib}-* nonfree/arpack-*
echo ''
/bin/rm -rf /sw/src/fink.build/root-octave-forge-20070821-1004
/bin/mkdir -p /sw/src/fink.build/root-octave-forge-20070821-1004/sw
/bin/mkdir -p /sw/src/fink.build/root-octave-forge-20070821-1004/DEBIAN
/usr/sbin/chown -R root:admin
/sw/src/fink.build/root-octave-forge-20070821-1004
/var/tmp/tmp.2.eHognL
#!/bin/bash -ev
export CPATH=/usr/X11R6/include:/sw/include
mkdir -p
/sw/src/fink.build/root-octave-forge-20070821-1004/sw/share/octave/packages
echo "pkg prefix
/sw/src/fink.build/root-octave-forge-20070821-1004/sw/share/octave/packages"
> tmp
echo "pkg global_list
/sw/src/fink.build/root-octave-forge-20070821-1004/sw/share/octave/octave_packages"
>> tmp
echo "pkg install *.tar.gz" >> tmp
for d in main extra nonfree; do cd $d; octave -q ../tmp; cd -; done
ans =
/sw/src/fink.build/root-octave-forge-20070821-1004/sw/share/octave/packages
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
In file included from /sw/include/jpeglib.h:28,
from jpgwrite.cc:18:
/sw/include/jconfig.h:12:1: warning: "HAVE_STDLIB_H" redefined
In file included from /sw/include/octave-2.9.14/octave/oct.h:32,
from jpgwrite.cc:11:
/sw/include/octave-2.9.14/octave/config.h:564:1: warning: this is the
location of the previous definition
In file included from /sw/include/jpeglib.h:28,
from jpgread.cc:49:
/sw/include/jconfig.h:12:1: warning: "HAVE_STDLIB_H" redefined
In file included from /sw/include/octave-2.9.14/octave/oct.h:32,
from jpgread.cc:41:
/sw/include/octave-2.9.14/octave/config.h:564:1: warning: this is the
location of the previous definition
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
mkoctfile: stripping disabled on this platform
panic: Segmentation fault -- stopping myself...
/var/tmp/tmp.2.eHognL: line 7: 13907 Segmentation fault octave -q
../tmp
### execution of /var/tmp/tmp.2.eHognL failed, exit code 139
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-octave-forge-20070821-1004
(Reading database ... 63105 files and directories currently installed.)
Removing fink-buildlock-octave-forge-20070821-1004 ...
Failed: phase installing: octave-forge-20070821-1004 failed
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