Hi Derek, Alexander, Thanks for looking into this! I'm still at a loss too.
All the best, --Buz On May 13, 2010, at 11:40 AM, Derek Homeier wrote: > Hi Alexander, Buz, > > I can confirm that this appears to be an issue with python2.5 on 10.6, and > it's apparently > an installation problem on the python side (64bit-installation in my case). > >> find /System/Library/Frameworks/Python.framework -name mmap* > /System/Library/Frameworks/Python.framework/Versions/2.3/lib/python2.3/lib-dynload/mmap.so > /System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/lib-dynload/mmap.so > /System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/lib-dynload/mmap.so >> find /sw/lib/python2.6 -name mmap* > /sw/lib/python2.6/lib-dynload/mmap.so >> find /sw/lib/python2.5 -name mmap* > > - nothing there. numpy.test() also fails on importing mmap. I could not track > this much > further down, embarrassingly I could not even reproduce how I had installed > python2.5 > in the first place, as there was a python25_2.5.4-102 installed, but the > package descriptions > both in stable and unstable state: > Package: python25 > Version: 2.5.4 > Revision: 1 > Epoch: 1 > Distribution: 10.4, 10.5 > > (!) > > Nb. this is a distribution bootstrapped on Snow Leopard in 64bit, never > updated from 10.5. > > I tried to investigate a bit further, so I updated the package in my local > tree to 2.5.5 and, > noticing that one difference between the python25 and python26 packages was > the > ConfigureParams: --enable-shared field, I added this flag to the python25 > package as well. > python-2.5.5 builds that way and appears to work (is there a generic .test() > for the python > interpreter itself?), but still does not install mmap.so. > > I am out or my depth here for now, so I am passing this one to whoever else > might have > another suggestion. > > HTH, > Derek > >>>>> >>>>> Python 2.5.4 (r254:67916, Apr 22 2010, 12:57:40) >>>>> Type "copyright", "credits" or "license" for more information. >>>>> >>>>> IPython 0.8.2 -- An enhanced Interactive Python. >>>>> ? -> Introduction and overview of IPython's features. >>>>> %quickref -> Quick reference. >>>>> help -> Python's own help system. >>>>> object? -> Details about 'object'. ?object also works, ?? prints more. >>>>> >>>>> In [1]: import scipy >>>>> >>>>> In [2]: from scipy.io.array_import import read_array >>>>> --------------------------------------------------------------------------- >>>>> ImportError Traceback (most recent call >>>>> last) >>>>> >>>>> /Users/buz/Documents/GTD/GTD Supporting Information/Work/Make an >>>>> O2-tolerant Hydrogenase/Sequence 2_12_2/Homology Model/<ipython console> >>>>> in <module>() >>>>> >>>>> /sw/lib/python2.5/site-packages/scipy/io/__init__.py in <module>() >>>>> 78 >>>>> 79 # netCDF file support >>>>> ---> 80 from netcdf import netcdf_file, netcdf_variable >>>>> 81 >>>>> 82 from recaster import sctype_attributes, Recaster >>>>> >>>>> /sw/lib/python2.5/site-packages/scipy/io/netcdf.py in <module>() >>>>> 16 >>>>> 17 import struct >>>>> ---> 18 import mmap >>>>> 19 >>>>> 20 from numpy import ndarray, zeros, array >>>>> >>>>> ImportError: No module named mmap >>>>> >>>>> In [3]: >>>>> >>>> > > > ------------------------------------------------------------------------------ > > _______________________________________________ > Fink-users mailing list > Fink-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/fink-users ------------------------------------------------------------------------------ _______________________________________________ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users
