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On 8/10/10 5:37 PM, Daniel E. Macks wrote:
> Alexander Hansen <[email protected]> said:
<snip>

>>>
>>> Question: when (or more importantly, why) did EMBOSS suddenly require the 
>>> installation of (all of) 263 dependencies, including what appears to be all 
>>> of GNOME?
>>
>> The all-of-gnome thing probably came from gnuplot.  You can use
>> gnuplot-nogtk to avoid that.
> 
> Also the latest (as of -101) emboss package relies on external
> (separate packages) of several things that used to be internal. In
> particular, plplot is a huge library that is no longer build within
> emboss itself. The plplot packaging is itself using lots of gnome
> things that emboss doesn't need. To quote a note in the emboss
> packaging file:
> 
>   # plplot's -nognome varianting is a disaster (adding/removing can
>   # change who if anyone supplies various headers and libs).
> 
> It's fixable (tease apart the non-gnome stuff into a clean independent
> package set) but not yet fixed. The plplot that comes with emboss is
> its own packaging disaster that's *not* fixable and had led to all
> sorts of other breakage in the previous packaging of the emboss suite.
> So until I finish cleaning up plplot, "users of plplot" (i.e., you, if
> you update emboss) are stuck getting gnome stuff.
> 
> If the previous emboss you had installed (I assume you had it, because
> update-all saw it was present-and-old) was working fine, there's no
> urgency to updating it. The changes are *just* to the packaging
> layout: shifting lots of things to external and solving lots of binary
> compatibility problems in its included libraries. Updates to plplot,
> which should trim out most of the gnome stuff, will probably take
> another week or so.
> 
> dan
> 
plplot builds against octave, so it brings that into the mix, too.

- -- 
Alexander Hansen
Fink User Liaison
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