Hi,
I have recently upgraded my system (MacPro 2x2.66 GHz Dual-Core Intel Xeon)
from tiger to show leopard using the MacBoxSet. After the upgrade I have been
unable to update fink. Moreover, Fink is completely inoperative. I can not
install any software with it. Here follows the error after the command fink
selfupdate and after the command fink install rasmol. Please, help.
fink selfupdate
......
.....
ld: warning: in iconv.o, file is not of required architecture
ld: warning: in ../srclib/libicrt.a, file is not of required architecture
ld: warning: in ../lib/.libs/libiconv.dylib, file is not of required
architecture
ld: warning: in
/sw/src/fink.build/libiconv-1.12-4/libiconv-1.12/../_inst/sw/lib/libintl.a,
file is not of required architecture
Undefined symbols:
"_main", referenced from:
start in crt1.10.6.o
ld: symbol(s) not found
collect2: ld returned 1 exit status
make[1]: *** [install] Error 1
make: *** [install] Error 2
### execution of make failed, exit code 2
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-libiconv-1.12-4
(Reading database ... 74407 files and directories currently installed.)
Removing fink-buildlock-libiconv-1.12-4 ...
Failed: phase installing: libiconv-1.12-4 failed
Before reporting any errors, please run "fink selfupdate" and
try again. If you continue to have issues, please check to see if the
FAQ on fink's website solves the problem. If not, ask on the fink-users
or fink-beginners mailing lists, with a carbon copy to the maintainer:
Fink Core Group <[email protected]>
Note that this is preferable to emailing the maintainer directly, since
most fink package maintainers do not have access to all possible
hardware and software configurations.
Here follows the error after trying to install rasmol.
fink install rasmol
....
Setting up fink-buildlock-rasmol-2.7.5-3 (2010.10.22-15.48.07) ...
gzip -dc /sw/src/RasMol_2.7.5.tar.gz | /sw/bin/tar -xf - --no-same-owner
--no-same-permissions
gzip -dc /sw/src/CBFlib-0.8.1.tar.gz | /sw/bin/tar -xf - --no-same-owner
--no-same-permissions
gzip -dc /sw/src/CQRlib-1.0.3.tar.gz | /sw/bin/tar -xf - --no-same-owner
--no-same-permissions
gzip -dc /sw/src/CVector-1.0.3.tar.gz | /sw/bin/tar -xf - --no-same-owner
--no-same-permissions
gzip -dc /sw/src/NearTree-2.1.3.tar.gz | /sw/bin/tar -xf - --no-same-owner
--no-same-permissions
[ -r /sw/fink/dists/stable/main/finkinfo/sci/rasmol.patch ]
sed 's|@PREFIX@|/sw|g' </sw/fink/dists/stable/main/finkinfo/sci/rasmol.patch
>rasmol.patch
patch -p1 <rasmol.patch
patching file src/Imakefile
patching file src/rasmol.h
/bin/rm external_packages/CVector-1.0.3/CVector.o
/bin/rm external_packages/CQRlib-1.0.3/.libs/cqrlib.o
/var/tmp/tmp.1.cSzrwE
#!/bin/sh -ev
export PATH=/sw/lib/xmkmf/bin:$PATH
export IMAKEINCLUDE=-I/sw/lib/X11/config
cd src
xmkmf
/var/tmp/tmp.1.cSzrwE: line 5: xmkmf: command not found
### execution of /var/tmp/tmp.1.cSzrwE failed, exit code 127
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-rasmol-2.7.5-3
(Reading database ... 74407 files and directories currently installed.)
Removing fink-buildlock-rasmol-2.7.5-3 ...
Failed: phase compiling: rasmol-2.7.5-3 failed
Before reporting any errors, please run "fink selfupdate" and
try again. If you continue to have issues, please check to see if the
FAQ on fink's website solves the problem. If not, ask on the fink-users
or fink-beginners mailing lists, with a carbon copy to the maintainer:
None <[email protected]>
Note that this is preferable to emailing the maintainer directly, since
most fink package maintainers do not have access to all possible
hardware and software configurations.
########################################################
Dr. Pedro A Reche, PhD
Laboratorio de ImmunoMedicina,
Dpto. Microbiologia I (Inmunologia),
Facultad de Medicina, Universidad Complutense de Madrid
Madrid 28040, SPAIN
+++++++++++++++++
TL: 91 394 7229
FX: 91 394 1641
W3: http://imed.med.ucm.es/Tools/
########################################################
------------------------------------------------------------------------------
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Create new apps & games for the Nokia N8 for consumers in U.S. and Canada
$10 million total in prizes - $4M cash, 500 devices, nearly $6M in marketing
Develop with Nokia Qt SDK, Web Runtime, or Java and Publish to Ovi Store
http://p.sf.net/sfu/nokia-dev2dev
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