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On 10/12/11 12:16 PM, gary thompson wrote:
> I have had problems getting fink to install molmol under lion
> 
> the compilation ended with an error 2 from the linker 
> /usr/bin/ranlib ../../lib/libcmd.a /bin/sleep 2 cd cmdfig; make
> default gcc  -I../../tools/include -I../../sg/include
> -I../../include -DMAXINT=INT_MAX -I../.. -I/sw/include
> -I/usr/X11R6/include -bind_at_load -O -bind_at_load -Wall
> -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load  -c -o ExFigDist.o ExFigDist.c gcc
> -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load -O -bind_at_load -Wall -I../../tools/include
> -I../../sg/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load  -c -o
> ExFigAngles.o ExFigAngles.c gcc  -I../../tools/include
> -I../../sg/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load -O -bind_at_load
> -Wall -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load  -c -o ExFigCircles.o ExFigCircles.c gcc
> -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load -O -bind_at_load -Wall -I../../tools/include
> -I../../sg/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load  -c -o
> ExFigContact.o ExFigContact.c gcc  -I../../tools/include
> -I../../sg/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load -O -bind_at_load
> -Wall -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load  -c -o ExFigLimit.o ExFigLimit.c gcc
> -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load -O -bind_at_load -Wall -I../../tools/include
> -I../../sg/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load  -c -o
> ExFigRamach.o ExFigRamach.c cd cip; make default gcc
> -I../../tools/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load -O -bind_at_load
> -Wall -I../../tools/include -I../../include -DMAXINT=INT_MAX
> -I../.. -I/sw/include -I/usr/X11R6/include -bind_at_load  -c -o
> Cip.o Cip.c gcc  -I../../tools/include -I../../sg/include
> -I../../include -DMAXINT=INT_MAX -I../.. -I/sw/include
> -I/usr/X11R6/include -bind_at_load -O -bind_at_load -Wall
> -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load  -c -o ExFigOff.o ExFigOff.c gcc
> -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load -O -bind_at_load -Wall -I../../tools/include
> -I../../sg/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load  -c -o FigUtil.o
> FigUtil.c cd main; make default gcc  -I../../tools/include
> -I../../sg/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load -O -bind_at_load
> -Wall -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load  -c -o MolMol.o MolMol.c gcc  -I../../tools/include
> -I../../sg/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load -O -bind_at_load
> -Wall -I../../tools/include -I../../sg/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load  -c -o MolInit.o MolInit.c gcc  -I../../tools/include
> -I../../include -DMAXINT=INT_MAX -I../.. -I/sw/include
> -I/usr/X11R6/include -bind_at_load -O -bind_at_load -Wall
> -I../../tools/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load  -c -o Arg.o
> Arg.c gcc  -I../../tools/include -I../../include -DMAXINT=INT_MAX
> -I../.. -I/sw/include -I/usr/X11R6/include -bind_at_load -O
> -bind_at_load -Wall -I../../tools/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load  -c -o History.o History.c gcc  -I../../tools/include
> -I../../include -DMAXINT=INT_MAX -I../.. -I/sw/include
> -I/usr/X11R6/include -bind_at_load -O -bind_at_load -Wall
> -I../../tools/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load  -c -o
> SelHistory.o SelHistory.c gcc  -I../../tools/include
> -I../../include -DMAXINT=INT_MAX -I../.. -I/sw/include
> -I/usr/X11R6/include -bind_at_load -O -bind_at_load -Wall
> -I../../tools/include -I../../include -DMAXINT=INT_MAX -I../..
> -I/sw/include -I/usr/X11R6/include -bind_at_load  -c -o TextCmd.o
> TextCmd.c gcc  -I../../tools/include -I../../include
> -DMAXINT=INT_MAX -I../.. -I/sw/include -I/usr/X11R6/include
> -bind_at_load -O -bind_at_load -Wall -I../../tools/include
> -I../../include -DMAXINT=INT_MAX -I../.. -I/sw/include
> -I/usr/X11R6/include -bind_at_load  -c -o DrawobjCmd.o
> DrawobjCmd.c ar r ../../lib/libcip.a Cip.o Arg.o History.o
> SelHistory.o TextCmd.o DrawobjCmd.o /usr/bin/ranlib
> ../../lib/libcip.a ### execution of /var/tmp/tmp.1.ZoweJs failed,
> exit code 2 Removing runtime build-lock... Removing build-lock
> package... /sw/bin/dpkg-lockwait -r
> fink-buildlock-molmol-2k.2.0-1048 (Reading database ... 5860 files
> and directories currently installed.) Removing
> fink-buildlock-molmol-2k.2.0-1048 ... Failed: phase compiling:
> molmol-2k.2.0-1048 failed
> 
> Before reporting any errors, please run "fink selfupdate" and try
> again. If you continue to have issues, please check to see if the
> FAQ on Fink's website solves the problem.  If not, ask on one of
> these mailing lists:
> 
> The Fink Users List <fink-users@lists.sourceforge.net> The Fink
> Beginners List <fink-beginn...@lists.sourceforge.net>,
> 
> with a carbon copy to the maintainer:
> 
> Karl-Michael Schindler <karl-michael.schind...@web.de>
> 
> Note that this is preferable to emailing just the maintainer
> directly, since most fink package maintainers do not have access to
> all possible hardware and software configurations.
> 
> Please try to include the complete error message in your report.
> This generally consists of a compiler line starting with e.g. "gcc"
> or "g++" followed by the actual error output from the compiler.
> 
> Also include the following system information: Package manager
> version: 0.31.2 Distribution version: selfupdate-rsync Wed Oct 12
> 16:30:42 2011, 10.7, x86_64 Trees: local/main stable/main Xcode:
> 4.1
> 
> gary-thompsons-Mac-Pro:~ garyt$
> 
> 
> as a test I have also installed gawk which does work so my fink
> installation is fine

Try setting the number of processors to 1 via "fink configure" and see
if that allows the build to finish.  There's no obvious error in what
you've posted, so it looks like you had a thread fail and it took a
while for the others to finish up.

- -- 
Alexander Hansen, Ph.D.
Fink User Liaison
http://finkakh.wordpress.com/
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