On 2/18/2012 11:07 PM, Zifeng Jiang wrote:
> Does anyone can help install bioperl on Mac 10.7.3? It is not
> available right now.

Please try the following and then please report back if it works so that 
bioperl can be added to the official 10.7 distribution:

Download the following 2 files and save them to

/sw/fink/dists/local/main/finkinfo

<http://fink.cvs.sourceforge.net/viewvc/fink/dists/10.4/stable/main/finkinfo/libs/perlmods/bioperl-pm.info>

<http://fink.cvs.sourceforge.net/viewvc/fink/dists/10.4/stable/main/finkinfo/libs/perlmods/bioperl-pm.patch>

Edit bioperl-pm.info that you just downloaded so that line 44 only lists 
"5.12.3" (no quotes) inside the parentheses.

Then try 'fink install bioperl-pm5123' in Terminal.app.  It will have to 
install a lot of other perl modules, but the build should finish 
successfully.  Please test that bioperl works as expected and let us know.

Hanspeter

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