Hi,
I use :
fink selfupdate
fink update-all
for ccp4 :
..........
wall clock time: 4 minutes 9.43 seconds (249.43 seconds total)
cd exe
cp phaser $CCP4/bin/.
cd $CCP4
# rapper manual install
if [[ -x src/rapper/bin/rapper ]]; then
cp src/rapper/bin/rapper $CCP4/bin/.
cp src/rapper/lib/libcord.1.0.3.dylib $CCP4/lib/libcord.1.dylib
cp src/rapper/lib/libgc.1.0.3.dylib $CCP4/lib/libgc.1.dylib
cp src/rapper/lib/libxml2.2.dylib $CCP4/lib/libxml2.2.dylib
/bin/rm -rf src/rapper/lib/*.dylib
mkdir -p share/rapper
cp src/rapper/LOOP/params.xml share/rapper/.
cp -R src/rapper/data share/rapper/.
fi
* export DYLD_LIBRARY_PATH=$CLIB*
* cd $CLIB/libccp4*
* gfortran -m64 -fno-second-underscore -O2 -fno-second-underscore
-L$CLIB -o data/fontpack data/fontpack.o -lccp4f -lccp4c*
* cd data*
* ./fontpack*
*At line 12 of file data/fontpack.f (unit = 10, file = 'fort.10')*
*Fortran runtime error: End of file*
Backtrace for this error:
+ 0 libgfortran.3.dylib 0x00000001029d1e93
_gfortrani_show_backtrace + 35
### execution of /tmp/fink.2HF5a failed, exit code 2
### execution of /tmp/fink.Ih6Jf failed, exit code 2
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-ccp4-6.3.0-5
(Reading database ... 309886 files and directories currently installed.)
Removing fink-buildlock-ccp4-6.3.0-5 ...
Reading buildlock packages...
/sw/bin/dpkg-lockwait -i
/sw/fink/dists/stable/main/binary-darwin-x86_64/sci/gpp4-dev_1.2.0-31_darwin-x86_64.deb
/sw/fink/dists/stable/main/binary-darwin-x86_64/sci/ssm-dev_0.1-31_darwin-x86_64.deb
/sw/fink/dists/stable/main/binary-darwin-x86_64/sci/mmdb-dev_1.23.2-31_darwin-x86_64.deb
/sw/fink/dists/stable/main/binary-darwin-x86_64/sci/clipper_2.1-31_darwin-x86_64.deb
/sw/fink/dists/stable/main/binary-darwin-x86_64/sci/clipper-dev_2.1-31_darwin-x86_64.deb
/sw/fink/dists/stable/main/binary-darwin-x86_64/languages/python_2.7.3-1_darwin-x86_64.deb
Selecting previously deselected package gpp4-dev.
(Reading database ... 309885 files and directories currently installed.)
Unpacking gpp4-dev (from .../gpp4-dev_1.2.0-31_darwin-x86_64.deb) ...
Selecting previously deselected package ssm-dev.
Unpacking ssm-dev (from .../ssm-dev_0.1-31_darwin-x86_64.deb) ...
Selecting previously deselected package mmdb-dev.
Unpacking mmdb-dev (from .../mmdb-dev_1.23.2-31_darwin-x86_64.deb) ...
Selecting previously deselected package clipper.
Unpacking clipper (from .../clipper_2.1-31_darwin-x86_64.deb) ...
Selecting previously deselected package clipper-dev.
Unpacking clipper-dev (from .../clipper-dev_2.1-31_darwin-x86_64.deb) ...
Selecting previously deselected package python.
Unpacking python (from .../python_2.7.3-1_darwin-x86_64.deb) ...
Setting up gpp4-dev (1.2.0-31) ...
Clearing dependency_libs of .la files being installed
Setting up ssm-dev (0.1-31) ...
Clearing dependency_libs of .la files being installed
Setting up mmdb-dev (1.23.2-31) ...
Clearing dependency_libs of .la files being installed
Setting up clipper (2.1-31) ...
Setting up clipper-dev (2.1-31) ...
Clearing dependency_libs of .la files being installed
Setting up python (2.7.3-1) ...
..........
Package manager version: 0.34.4
Distribution version: selfupdate-rsync Wed Jan 9 23:24:23 2013, 10.6,
x86_64
Trees: local/main stable/main stable/crypto unstable/main unstable/crypto
Xcode.app: 3.2.6
Xcode command-line tools: 3.2.6
ccp4-6.3.0-5 is set to build with only one job.
Thanks,
Shih-Kai Chou
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