Thomas,
   I am seeing the same failure with undefined symbols on fink 10.6 under Xcode 
4.2. I believe you
need to add the following change which eliminates the linkage failures here.

--- /sw/fink/10.6/stable/main/finkinfo/devel/doxygen.info       2013-02-11 
09:22:06.000000000 -0500
+++ doxygen.info        2013-02-14 09:17:53.000000000 -0500
@@ -2,7 +2,7 @@
 
 Package: doxygen
 Version: 1.8.3.1
-Revision: 1
+Revision: 2
 Source: ftp://ftp.stack.nl/pub/users/dimitri/%n-%v.src.tar.gz
 SourceDirectory: %n-%v
 Source-MD5: 31b0aaab51c5cab7db9f0ebbe9f85530
@@ -27,6 +27,10 @@
                                        tmake/lib/macosx-c++/tmake.conf \
                                        tmake/lib/macosx-intel-c++/tmake.conf \
                                        tmake/lib/macosx-uni-c++/tmake.conf 
+       sed -e 's|TMAKE_LINK            = c++|TMAKE_LINK                = c++ 
-L%p/lib|g' \
+                                       tmake/lib/macosx-c++/tmake.conf \
+                                       tmake/lib/macosx-intel-c++/tmake.conf \
+                                       tmake/lib/macosx-uni-c++/tmake.conf
 <<
 GCC: 4.0
 CompileScript: <<

This hack has been used by MacPorts for the last three years to eliminate the 
same problem 
with libiconv symbols.

https://trac.macports.org/changeset/57665/trunk/dports/textproc/doxygen/Portfile
https://trac.macports.org/ticket/20415

Thanks in advance for fixing this.
            Jack

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