On 28 Feb 2013, at 17:16, Alexander Hansen <[email protected]> wrote:
> On 2/28/13 9:23 AM, Valentina Erastova wrote: >> Thank you! >> >> I have managed to install gromacs and gromacs-mpi with fink on the other >> machine without problems. > > Provided that the machine where you had success is running an older or > the same operating system version as the one where you are having > problems, you can copy the archive files: > > /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-dev_4.6-2_darwin-x86_64.deb > /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-mpi-openmpi-shlibs_4.6-1_darwin-x86_64.deb > /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-mpi-openmpi_4.6-1_darwin-x86_64.deb > /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs-shlibs_4.6-2_darwin-x86_64.deb > /sw/fink/10.7/stable/main/binary-darwin-x86_64/sci/gromacs_4.6-2_darwin-x86_64.deb > > (change the paths as appropriate) to the machine where you are having > the problem, and then use > > dpkg -i <filenames> > > replacing <filenames> with e.g. > gromacs-mpi-openmpi-shlibs_4.6-1_darwin-x86_64.deb > gromacs-shlibs_4.6-2_darwin-x86_64.deb to install them. > >> >> I am a little confused with fink now, as when I install gromacs it wipes >> away libraries for gromacs-mpi and vice-versa >> >> oparin02:~ d47fvj$ which mdrun >> /sw/bin/mdrun >> oparin02:~ d47fvj$ which mdrun_mpi >> oparin02:~ d47fvj$ fink install gromacs-mpi >> Information about 7002 packages read in 1 seconds. >> The following package will be installed or updated: >> gromacs-mpi >> Reading buildlock packages... >> /sw/bin/dpkg-lockwait -i >> /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/gromacs-mpi_4.6-2_darwin-x86_64.deb >> Selecting previously deselected package gromacs-mpi. >> dpkg: considering removing gromacs in favour of gromacs-mpi ... >> dpkg: yes, will remove gromacs in favour of gromacs-mpi. >> (Reading database ... 37676 files and directories currently installed.) >> Unpacking gromacs-mpi (from .../gromacs-mpi_4.6-2_darwin-x86_64.deb) ... >> Setting up gromacs-mpi (4.6-2) ... >> >> I must be doing something wrong:/ >> How do I make sure I get both gromacs and gromacs-mpi at the same time? I am >> not sure where fink is storing files. >> >> Thank you very much! >> >> >> > > You can't have them both at the same time in the same Fink tree, by > design. You can use "dpkg -L <packagename>" to see what is installed > where in a package. can I somehow move them to /usr/local/src (i normally have everything there) Sorry very confused here. > > -- > Alexander Hansen, Ph.D. > Fink User Liaison > My package updates: http://finkakh.wordpress.com/ ------------------------------------------------------------------------------ Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite for free today: http://p.sf.net/sfu/appdyn_d2d_feb _______________________________________________ Fink-users mailing list [email protected] List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
