Dear Jon: I can't reproduce it, having tried on three 10.8.4 computers and one 10.6.8.
Are you running something else (10.7 maybe)? The only thing that changed is a newer compiler (gcc4.8 vs. 4.7). Bill William G. Scott Professor Department of Chemistry and Biochemistry and The Center for the Molecular Biology of RNA 228 Sinsheimer Laboratories University of California at Santa Cruz Santa Cruz, California 95064 USA On Jul 5, 2013, at 1:52 AM, Jonathan Grimes <[email protected]> wrote: > > had this installation error when running fink update-all. > > software that was installed or updated: > clipper clipper-dev clipper-shlibs coot coot-shlibs gpp4-dev gpp4-shlibs > > many thanks > jon grimes > > > > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_diskio_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_diskio_f.Tpo -c ccp4_diskio_f.c -fno-common -DPIC -o > .libs/libgpp4f_la-ccp4_diskio_f.o > ccp4_diskio_f.c:386:5: warning: add explicit braces to avoid dangling else > [-Wdangling-else] > else > ^ > ccp4_diskio_f.c:414:5: warning: add explicit braces to avoid dangling else > [-Wdangling-else] > else > ^ > ccp4_diskio_f.c:442:5: warning: add explicit braces to avoid dangling else > [-Wdangling-else] > else > ^ > ccp4_diskio_f.c:470:5: warning: add explicit braces to avoid dangling else > [-Wdangling-else] > else > ^ > ccp4_diskio_f.c:498:5: warning: add explicit braces to avoid dangling else > [-Wdangling-else] > else > ^ > ccp4_diskio_f.c:709:43: warning: expression result unused [-Wunused-value] > for ( *istrm = 1; *istrm == MAXFILES; *istrm++) > ^~~~~~~~ > 6 warnings generated. > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_diskio_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_diskio_f.Tpo -c ccp4_diskio_f.c -o > libgpp4f_la-ccp4_diskio_f.o >/dev/null 2>&1 > mv -f .deps/libgpp4f_la-ccp4_diskio_f.Tpo .deps/libgpp4f_la-ccp4_diskio_f.Plo > /bin/sh ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" > -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.2.0\" > -DPACKAGE_STRING=\"gpp4\ 1.2.0\" -DPACKAGE_BUGREPORT=\"[email protected]\" > -DPACKAGE=\"gpp4\" -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 > -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 > -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 > -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 > -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 > -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_parser_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_parser_f.Tpo -c -o libgpp4f_la-ccp4_parser_f.lo `test > -f 'ccp4_parser_f.c' || echo './'`ccp4_parser_f.c > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_parser_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_parser_f.Tpo -c ccp4_parser_f.c -fno-common -DPIC -o > .libs/libgpp4f_la-ccp4_parser_f.o > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_parser_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_parser_f.Tpo -c ccp4_parser_f.c -o > libgpp4f_la-ccp4_parser_f.o >/dev/null 2>&1 > mv -f .deps/libgpp4f_la-ccp4_parser_f.Tpo .deps/libgpp4f_la-ccp4_parser_f.Plo > /bin/sh ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" > -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.2.0\" > -DPACKAGE_STRING=\"gpp4\ 1.2.0\" -DPACKAGE_BUGREPORT=\"[email protected]\" > -DPACKAGE=\"gpp4\" -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 > -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 > -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 > -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 > -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 > -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-cmaplib_f.lo -MD -MP -MF > .deps/libgpp4f_la-cmaplib_f.Tpo -c -o libgpp4f_la-cmaplib_f.lo `test -f > 'cmaplib_f.c' || echo './'`cmaplib_f.c > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-cmaplib_f.lo -MD -MP -MF > .deps/libgpp4f_la-cmaplib_f.Tpo -c cmaplib_f.c -fno-common -DPIC -o > .libs/libgpp4f_la-cmaplib_f.o > cmaplib_f.c:218:1: warning: control may reach end of non-void function > [-Wreturn-type] > } > ^ > cmaplib_f.c:233:3: warning: '/*' within block comment [-Wcomment] > /* initialise and clear the relevant */ > ^ > cmaplib_f.c:688:7: warning: add explicit braces to avoid dangling else > [-Wdangling-else] > } else { > ^ > cmaplib_f.c:755:7: warning: add explicit braces to avoid dangling else > [-Wdangling-else] > } else { > ^ > 4 warnings generated. > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-cmaplib_f.lo -MD -MP -MF > .deps/libgpp4f_la-cmaplib_f.Tpo -c cmaplib_f.c -o libgpp4f_la-cmaplib_f.o > >/dev/null 2>&1 > mv -f .deps/libgpp4f_la-cmaplib_f.Tpo .deps/libgpp4f_la-cmaplib_f.Plo > /bin/sh ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" > -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.2.0\" > -DPACKAGE_STRING=\"gpp4\ 1.2.0\" -DPACKAGE_BUGREPORT=\"[email protected]\" > -DPACKAGE=\"gpp4\" -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 > -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 > -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 > -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 > -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 > -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-csymlib_f.lo -MD -MP -MF > .deps/libgpp4f_la-csymlib_f.Tpo -c -o libgpp4f_la-csymlib_f.lo `test -f > 'csymlib_f.c' || echo './'`csymlib_f.c > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-csymlib_f.lo -MD -MP -MF > .deps/libgpp4f_la-csymlib_f.Tpo -c csymlib_f.c -fno-common -DPIC -o > .libs/libgpp4f_la-csymlib_f.o > csymlib_f.c:947:9: warning: implicit declaration of function > 'ccp4_spgrp_equal_order' is invalid in C99 [-Wimplicit-function-declaration] > ret = ccp4_spgrp_equal_order(*msym1, op1, *msym2, op2); > ^ > 1 warning generated. > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-csymlib_f.lo -MD -MP -MF > .deps/libgpp4f_la-csymlib_f.Tpo -c csymlib_f.c -o libgpp4f_la-csymlib_f.o > >/dev/null 2>&1 > mv -f .deps/libgpp4f_la-csymlib_f.Tpo .deps/libgpp4f_la-csymlib_f.Plo > /bin/sh ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" > -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.2.0\" > -DPACKAGE_STRING=\"gpp4\ 1.2.0\" -DPACKAGE_BUGREPORT=\"[email protected]\" > -DPACKAGE=\"gpp4\" -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 > -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 > -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 > -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 > -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 > -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_general_f.Tpo -c -o libgpp4f_la-ccp4_general_f.lo > `test -f 'ccp4_general_f.c' || echo './'`ccp4_general_f.c > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_general_f.Tpo -c ccp4_general_f.c -fno-common -DPIC > -o .libs/libgpp4f_la-ccp4_general_f.o > ccp4_general_f.c:86:23: warning: implicit declaration of function 'outbuf_' > is invalid in C99 [-Wimplicit-function-declaration] > FORTRAN_CALL(OUTBUF,outbuf,(),(),()); > ^ > ../src/ccp4_fortran.h:196:5: note: expanded from macro 'FORTRAN_CALL' > name##_ p_sun > ^ > <scratch space>:2:1: note: expanded from macro 'outbuf' > outbuf_ > ^ > ccp4_general_f.c:111:5: warning: implicit declaration of function > '_gfortran_getarg_i4' is invalid in C99 [-Wimplicit-function-declaration] > _gfortran_getarg_i4(&i,arg,arg_len); > ^ > ccp4_general_f.c:142:29: warning: implicit declaration of function > 'ccp4h_init_' is invalid in C99 [-Wimplicit-function-declaration] > FORTRAN_CALL (CCP4H_INIT, ccp4h_init, (), (), ()); > ^ > ../src/ccp4_fortran.h:196:5: note: expanded from macro 'FORTRAN_CALL' > name##_ p_sun > ^ > <scratch space>:2:1: note: expanded from macro 'ccp4h_init' > ccp4h_init_ > ^ > ccp4_general_f.c:215:37: warning: implicit declaration of function > 'ccp4_fflush_stdout_' is invalid in C99 [-Wimplicit-function-declaration] > FORTRAN_CALL (CCP4_FFLUSH_STDOUT, ccp4_fflush_stdout, (), (), ()); > ^ > ../src/ccp4_fortran.h:196:5: note: expanded from macro 'FORTRAN_CALL' > name##_ p_sun > ^ > <scratch space>:2:1: note: expanded from macro 'ccp4_fflush_stdout' > ccp4_fflush_stdout_ > ^ > ccp4_general_f.c:219:38: warning: implicit declaration of function > 'ccp4h_summary_beg_' is invalid in C99 [-Wimplicit-function-declaration] > FORTRAN_CALL (CCP4H_SUMMARY_BEG, ccp4h_summary_beg, (), (), ()); > ^ > ../src/ccp4_fortran.h:196:5: note: expanded from macro 'FORTRAN_CALL' > name##_ p_sun > ^ > <scratch space>:2:1: note: expanded from macro 'ccp4h_summary_beg' > ccp4h_summary_beg_ > ^ > ccp4_general_f.c:227:38: warning: implicit declaration of function > 'ccp4h_summary_end_' is invalid in C99 [-Wimplicit-function-declaration] > FORTRAN_CALL (CCP4H_SUMMARY_END, ccp4h_summary_end, (), (), ()); > ^ > ../src/ccp4_fortran.h:196:5: note: expanded from macro 'FORTRAN_CALL' > name##_ p_sun > ^ > <scratch space>:2:1: note: expanded from macro 'ccp4h_summary_end' > ccp4h_summary_end_ > ^ > ccp4_general_f.c:302:12: warning: implicit declaration of function 'time' is > invalid in C99 [-Wimplicit-function-declaration] > tim0 = time(NULL); > ^ > ccp4_general_f.c:373:32: warning: implicit declaration of function > 'ccp4h_pre_beg_' is invalid in C99 [-Wimplicit-function-declaration] > FORTRAN_CALL (CCP4H_PRE_BEG, ccp4h_pre_beg, (), (), ()); > ^ > ../src/ccp4_fortran.h:196:5: note: expanded from macro 'FORTRAN_CALL' > name##_ p_sun > ^ > <scratch space>:2:1: note: expanded from macro 'ccp4h_pre_beg' > ccp4h_pre_beg_ > ^ > 8 warnings generated. > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_general_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_general_f.Tpo -c ccp4_general_f.c -o > libgpp4f_la-ccp4_general_f.o >/dev/null 2>&1 > mv -f .deps/libgpp4f_la-ccp4_general_f.Tpo > .deps/libgpp4f_la-ccp4_general_f.Plo > /bin/sh ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" > -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.2.0\" > -DPACKAGE_STRING=\"gpp4\ 1.2.0\" -DPACKAGE_BUGREPORT=\"[email protected]\" > -DPACKAGE=\"gpp4\" -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 > -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 > -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 > -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 > -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 > -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_unitcell_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_unitcell_f.Tpo -c -o libgpp4f_la-ccp4_unitcell_f.lo > `test -f 'ccp4_unitcell_f.c' || echo './'`ccp4_unitcell_f.c > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_unitcell_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_unitcell_f.Tpo -c ccp4_unitcell_f.c -fno-common -DPIC > -o .libs/libgpp4f_la-ccp4_unitcell_f.o > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-ccp4_unitcell_f.lo -MD -MP -MF > .deps/libgpp4f_la-ccp4_unitcell_f.Tpo -c ccp4_unitcell_f.c -o > libgpp4f_la-ccp4_unitcell_f.o >/dev/null 2>&1 > mv -f .deps/libgpp4f_la-ccp4_unitcell_f.Tpo > .deps/libgpp4f_la-ccp4_unitcell_f.Plo > /bin/sh ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" > -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.2.0\" > -DPACKAGE_STRING=\"gpp4\ 1.2.0\" -DPACKAGE_BUGREPORT=\"[email protected]\" > -DPACKAGE=\"gpp4\" -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 > -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 > -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 > -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 > -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 > -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF > .deps/libgpp4f_la-cmtzlib_f.Tpo -c -o libgpp4f_la-cmtzlib_f.lo `test -f > 'cmtzlib_f.c' || echo './'`cmtzlib_f.c > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF > .deps/libgpp4f_la-cmtzlib_f.Tpo -c cmtzlib_f.c -fno-common -DPIC -o > .libs/libgpp4f_la-cmtzlib_f.o > cmtzlib_f.c:154:33: warning: implicit declaration of function > 'ccp4h_init_lib_' is invalid in C99 [-Wimplicit-function-declaration] > FORTRAN_CALL (CCP4H_INIT_LIB, ccp4h_init_lib, (&ihtml,&isumm), > (&ihtml,&isumm), (&ihtml,&isumm)); > ^ > ../src/ccp4_fortran.h:196:5: note: expanded from macro 'FORTRAN_CALL' > name##_ p_sun > ^ > <scratch space>:2:1: note: expanded from macro 'ccp4h_init_lib' > ccp4h_init_lib_ > ^ > cmtzlib_f.c:1192:7: warning: passing 'MTZCOL *[10000]' to parameter of type > 'const MTZCOL **' discards qualifiers in nested pointer types > [-Wincompatible-pointer-types] > collookup[mindex-1], > ^~~~~~~~~~~~~~~~~~~ > ../src/cmtzlib.h:782:17: note: passing argument to parameter 'lookup' here > const MTZCOL *lookup[], const int ncols, const int iref); > ^ > cmtzlib_f.c:1689:17: warning: using the result of an assignment as a > condition without parentheses [-Wparentheses] > if (icol = mtzdata[*mindx-1]->xtal[i]->set[j]->col[k]->source) > ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > cmtzlib_f.c:1689:17: note: place parentheses around the assignment to silence > this warning > if (icol = mtzdata[*mindx-1]->xtal[i]->set[j]->col[k]->source) > ^ > ( ) > cmtzlib_f.c:1689:17: note: use '==' to turn this assignment into an equality > comparison > if (icol = mtzdata[*mindx-1]->xtal[i]->set[j]->col[k]->source) > ^ > == > 3 warnings generated. > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-cmtzlib_f.lo -MD -MP -MF > .deps/libgpp4f_la-cmtzlib_f.Tpo -c cmtzlib_f.c -o libgpp4f_la-cmtzlib_f.o > >/dev/null 2>&1 > mv -f .deps/libgpp4f_la-cmtzlib_f.Tpo .deps/libgpp4f_la-cmtzlib_f.Plo > /bin/sh ../libtool --tag=CC --mode=compile gcc -DPACKAGE_NAME=\"gpp4\" > -DPACKAGE_TARNAME=\"gpp4\" -DPACKAGE_VERSION=\"1.2.0\" > -DPACKAGE_STRING=\"gpp4\ 1.2.0\" -DPACKAGE_BUGREPORT=\"[email protected]\" > -DPACKAGE=\"gpp4\" -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 > -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 > -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 > -DHAVE_FCNTL_H=1 -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 > -DHAVE_SYS_STAT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_MALLOC=1 -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 > -DHAVE_MEMMOVE=1 -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 > -DHAVE_RINT=1 -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-library_f.lo -MD -MP -MF > .deps/libgpp4f_la-library_f.Tpo -c -o libgpp4f_la-library_f.lo `test -f > 'library_f.c' || echo './'`library_f.c > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-library_f.lo -MD -MP -MF > .deps/libgpp4f_la-library_f.Tpo -c library_f.c -fno-common -DPIC -o > .libs/libgpp4f_la-library_f.o > library_f.c:57:14: warning: comparison of unsigned expression < 0 is always > false [-Wtautological-compare] > if (length < 0) > ~~~~~~ ^ ~ > library_f.c:114:15: warning: using the result of an assignment as a condition > without parentheses [-Wparentheses] > if (*result = ccp4_utils_setenv (temp_name)) > ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > library_f.c:114:15: note: place parentheses around the assignment to silence > this warning > if (*result = ccp4_utils_setenv (temp_name)) > ^ > ( ) > library_f.c:114:15: note: use '==' to turn this assignment into an equality > comparison > if (*result = ccp4_utils_setenv (temp_name)) > ^ > == > 2 warnings generated. > libtool: compile: gcc -DPACKAGE_NAME=\"gpp4\" -DPACKAGE_TARNAME=\"gpp4\" > -DPACKAGE_VERSION=\"1.2.0\" "-DPACKAGE_STRING=\"gpp4 1.2.0\"" > -DPACKAGE_BUGREPORT=\"[email protected]\" -DPACKAGE=\"gpp4\" > -DVERSION=\"1.2.0\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 > -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 > -DLT_OBJDIR=\".libs/\" -DHAVE_LIBM=1 -DSTDC_HEADERS=1 -DHAVE_FCNTL_H=1 > -DHAVE_FLOAT_H=1 -DHAVE_LIMITS_H=1 -DHAVE_STDDEF_H=1 -DHAVE_STDLIB_H=1 > -DHAVE_STDINT_H=1 -DHAVE_STRING_H=1 -DHAVE_SYS_FILE_H=1 -DHAVE_SYS_STAT_H=1 > -DHAVE_UNISTD_H=1 -DHAVE_WCHAR_H=1 -DHAVE_STDLIB_H=1 -DHAVE_MALLOC=1 > -DHAVE_STDLIB_H=1 -DHAVE_REALLOC=1 -DHAVE_VPRINTF=1 -DHAVE_MEMMOVE=1 > -DHAVE_MEMSET=1 -DHAVE_MKDIR=1 -DHAVE_POW=1 -DHAVE_PUTENV=1 -DHAVE_RINT=1 > -DHAVE_SETENV=1 -DHAVE_SQRT=1 -DHAVE_STRCHR=1 -DHAVE_STRDUP=1 > -DHAVE_STRERROR=1 -DHAVE_STRRCHR=1 -DHAVE_STRSTR=1 -DHAVE_STRLCPY=1 > -DGPP4_PREFIX=\"/sw\" -I. -I/sw/include -I ../src -DGFORTRAN > -I/sw/include/mmdb -g -O2 -MT libgpp4f_la-library_f.lo -MD -MP -MF > .deps/libgpp4f_la-library_f.Tpo -c library_f.c -o libgpp4f_la-library_f.o > >/dev/null 2>&1 > mv -f .deps/libgpp4f_la-library_f.Tpo .deps/libgpp4f_la-library_f.Plo > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o ccplib.lo > ccplib.f > libtool: compile: fort77 -g -O2 -c ccplib.f -fno-common -o .libs/ccplib.o > ccplib.f: > ccfill: > ccpalc: > ccpale: > ccpbyi: > ccpbyt: > ccpcpi: > ccpdex: > ccpdpn: > ccpe2i: > ccpgi2: > ccpgtb: > ccpi2i: > ccpiby: > ccpii2: > ccpmde: > ccpmvb: > ccpmvi: > ccpmvr: > ccpnun: > ccponl: > ccppsf: > csetnv: > ccppag: > ccpsi2: > ccpstb: > ccpsum: > ccptoi: > ccpufl: > ccp4_patch_level: > ccpzbi: > ccpzi: > ccpzr: > fdir: > fextn: > froot: > litend: > lenstr: > lunsti: > lunsto: > nbitst: > Warning on line 2091: local variable ival never used > Warning on line 2091: local variable kval never used > nocrlf: > stbits: > hkleq: > ccp4_hash_lookup: > ccp4_hash_setup: > ccp4_hash_zeroit: > lstlsq: > sthlsq: > sts3r4: > ccplib.f:764:17: warning: '&' within '|' [-Wbitwise-op-parentheses] > -ieight)) & 255 | lbit_shift((integer) i2[i__], (integer) > ~~~~~~~~~~^~~~~ ~ > ccplib.f:764:17: note: place parentheses around the '&' expression to silence > this warning > -ieight)) & 255 | lbit_shift((integer) i2[i__], (integer) > ^ > ccplib.f:920:17: warning: '&' within '|' [-Wbitwise-op-parentheses] > -ieight)) & 255 | lbit_shift((integer) i2[i__], (integer) > ~~~~~~~~~~^~~~~ ~ > ccplib.f:920:17: note: place parentheses around the '&' expression to silence > this warning > -ieight)) & 255 | lbit_shift((integer) i2[i__], (integer) > ^ > ccplib.f:2145:21: warning: '&' within '|' [-Wbitwise-op-parentheses] > *iword = *iword & kmsk | kval; > ~~~~~~~^~~~~~ ~ > ccplib.f:2145:21: note: place parentheses around the '&' expression to > silence this warning > *iword = *iword & kmsk | kval; > ^ > ( ) > 3 warnings generated. > libtool: compile: fort77 -g -O2 -c ccplib.f -o ccplib.o >/dev/null 2>&1 > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o fftlib.lo > fftlib.f > libtool: compile: fort77 -g -O2 -c fftlib.f -fno-common -o .libs/fftlib.o > fftlib.f: > cmplft: > srfp: > mdftkd: > r2cftk: > r3cftk: > r4cftk: > r5cftk: > r8cftk: > rpcftk: > hermft: > inv21: > realft: > rsymft: > sdiad: > diprp: > prmvci: > prmvcr: > libtool: compile: fort77 -g -O2 -c fftlib.f -o fftlib.o >/dev/null 2>&1 > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o modlib.lo > modlib.f > libtool: compile: fort77 -g -O2 -c modlib.f -fno-common -o .libs/modlib.o > modlib.f: > gmprd: > matmul4: > matmln: > detmat: > matvc4: > ml3mat: > inv44: > matmli: > matmultrans: > imatvec: > transfrm: > cross: > dot: > eigen_rs_asc: > Warning on line 666: local variable info never used > Warning on line 666: local variable work never used > Warning on line 666: local variable iwork never used > Warning on line 666: local variable isuppz never used > icross: > idot: > iminv3: > matmul: > matmulnm: > matvec: > matmulgen: > mc04b: > minvn: > minv3: > ranmar: > entry rmarin: > scalev: > transp: > unit: > vdif: > vset: > vsum: > zipin: > zipout: > zjvx: > jdvx: > jvx: > gamma: > msta1: > msta2: > libtool: compile: fort77 -g -O2 -c modlib.f -o modlib.o >/dev/null 2>&1 > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o parser.lo > parser.f > libtool: compile: fort77 -g -O2 -c parser.f -fno-common -o .libs/parser.o > parser.f: > keynum: > keyerr: > gtnrea: > gtnint: > gtprea: > gtpint: > sblank: > cmatch: > chkkey: > putlin: > blank: > lerror: > rdsymm: > Warning on line 794: lenstr declared EXTERNAL but never used. > rdhead: > rdcell: > rdreso: > rdscal: > rdresl: > gttrea: > gttint: > rdatomselect: > libtool: compile: fort77 -g -O2 -c parser.f -o parser.o >/dev/null 2>&1 > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o rwbrook.lo > rwbrook.f > libtool: compile: fort77 -g -O2 -c rwbrook.f -fno-common -o .libs/rwbrook.o > rwbrook.f: > xyzinit: > rbinit: > xyzopen: > xyzopen2: > Warning on line 600: local variable nsympdbs never used > Warning on line 600: local variable rsympdbs never used > Warning on line 600: local variable j never used > Warning on line 600: local variable k never used > Warning on line 600: local variable p never used > Warning on line 600: local variable nsymppdbs never used > Warning on line 600: local variable am never used > Warning on line 600: local variable bm never used > Warning on line 600: local variable jj never used > Warning on line 600: local variable iii never used > Warning on line 600: local variable ist never used > Warning on line 600: local variable namspg_cifs never used > Warning on line 600: local variable klen never used > Warning on line 600: local variable isym never used > Warning on line 600: local variable rchk1 never used > Warning on line 600: local variable rchk2 never used > Warning on line 600: local variable nampg never used > Warning on line 600: local variable iorth never used > Warning on line 600: local variable error never used > Warning on line 600: local variable volchk never used > Warning on line 600: local variable lspgrp never used > Warning on line 600: local variable nsymchk never used > Warning on line 600: local variable rsymchk never used > Warning on line 278: local variable iec never used > Warning on line 278: local variable orth never used > Warning on line 278: ccpdpn declared EXTERNAL but never used. > Warning on line 278: ccpexs declared EXTERNAL but never used. > Warning on line 278: ccpnun declared EXTERNAL but never used. > xyzclose: > xyzadvance: > Warning on line 773: local variable ite never used > Warning on line 773: local variable itype never used > xyzatom: > Warning on line 869: local variable u never used > Warning on line 869: local variable x never used > Warning on line 869: local variable y never used > Warning on line 869: local variable z never used > Warning on line 869: local variable occ never used > Warning on line 869: local variable itype never used > xyzcoord: > Warning on line 991: local variable id never used > Warning on line 991: local variable iz never used > Warning on line 991: local variable xx never used > Warning on line 991: local variable yy never used > Warning on line 991: local variable zz never used > Warning on line 991: local variable iser never used > Warning on line 991: local variable segid never used > Warning on line 991: local variable atnam never used > Warning on line 991: local variable iresn never used > Warning on line 991: local variable resno never used > Warning on line 991: local variable chnnam never used > Warning on line 991: local variable resnam never used > Warning on line 873: local variable eightpi2 never used > xyzrewd: > xyzbksp: > rbrook: > wbrook: > rbfrac2: > rbfrac: > rbrorf: > rbrorf2: > rbrinv: > rbfror: > rbfro1: > cvfrac2: > cvfrac: > cvanisob: > cvanisou: > Warning on line 2217: local variable twopi2 never used > rbcell: > rbrcel: > rbspgrp: > wbspgrp: > res3to1: > rbrecip: > sfread2: > sfread: > wbcell: > wremark: > Warning on line 2889: local variable outlin never used > rwbfin: > rwnohead: > num_expected_waters: > wbcells: > Warning on line 3069: local variable j never used > Warning on line 2990: rbfror declared EXTERNAL but never used. > Warning on line 2990: rbrinv declared EXTERNAL but never used. > rwbrook.f:2655:31: warning: '&&' within '||' [-Wlogical-op-parentheses] > if (nid != 1 || nid == 1 && (*(unsigned char *)&idin[1] == '+' || > ~~ ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > rwbrook.f:2655:31: note: place parentheses around the '&&' expression to > silence this warning > if (nid != 1 || nid == 1 && (*(unsigned char *)&idin[1] == '+' || > ^ > 1 warning generated. > libtool: compile: fort77 -g -O2 -c rwbrook.f -o rwbrook.o >/dev/null 2>&1 > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o libhtml.lo > libhtml.f > libtool: compile: fort77 -g -O2 -c libhtml.f -fno-common -o .libs/libhtml.o > libhtml.f: > ccp4h_init: > ccp4h_init_lib: > ccp4h_html_close: > ccp4h_toc_beg: > ccp4h_toc_ent: > ccp4h_toc_end: > ccp4h_graph_beg: > ccp4h_graph_end: > ccp4h_summary_beg: > ccp4h_summary_end: > ccp4h_pre_beg: > ccp4h_pre_end: > ccp4h_rule: > ccp4h_link: > ccp4h_link_key: > ccp4h_header: > libtool: compile: fort77 -g -O2 -c libhtml.f -o libhtml.o >/dev/null 2>&1 > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o > keyparse.lo keyparse.f > libtool: compile: fort77 -g -O2 -c keyparse.f -fno-common -o > .libs/keyparse.o > keyparse.f: > memoparse: > entry parsekey: > entry parsekeyarg: > entry parseint: > entry parsereal: > entry parsenargs: > entry parsenints: > entry parsenreals: > entry parsesubkey: > entry parsesubkeyarg: > entry parsesubint: > entry parsesubreal: > entry parsesubchar: > entry parsecell: > entry parsesymm: > entry parseatomselect: > entry parsereso: > entry parselabin: > entry parselabout: > entry parsefail: > entry parseend: > entry parsediagnose: > libtool: compile: fort77 -g -O2 -c keyparse.f -o keyparse.o >/dev/null 2>&1 > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o unix.lo > unix.f > libtool: compile: fort77 -g -O2 -c unix.f -fno-common -o .libs/unix.o > unix.f: > ccpopn: > vaxvms: > winmvs: > rtnbks: > ubytes: > ugerr: > ugtenv: > ugtuid: > uisatt: > ccpspw: > cexit: > ttsend: > ugtarg: > hciftime: > Warning on line 706: local variable timstr never used > ccp4_fflush_stdout: > libtool: compile: fort77 -g -O2 -c unix.f -o unix.o >/dev/null 2>&1 > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o > dna_output.lo dna_output.f > libtool: compile: fort77 -g -O2 -c dna_output.f -fno-common -o > .libs/dna_output.o > dna_output.f: > dna_set_no_output: > dna_start: > dna_end: > dna_real_item: > dna_double_item: > dna_integer_item: > dna_character_item: > dna_list_start: > dna_ilist_start: > dna_list_end: > dna_table_start: > dna_table_end: > dna_error: > dna_warning: > libtool: compile: fort77 -g -O2 -c dna_output.f -o dna_output.o >/dev/null > 2>&1 > /bin/sh ../libtool --tag=F77 --mode=compile fort77 -g -O2 -c -o pack_f.lo > pack_f.f > libtool: compile: fort77 -g -O2 -c pack_f.f -fno-common -o .libs/pack_f.o > pack_f.f: > pack_wordimage: > v2pack_wordimage: > pack_longimage: > Warning on line 108: inconsistent calling sequences for pack_wordimage_f, > arg 1: here integer variable, previously integer*2 variable. > v2pack_longimage: > Warning on line 140: inconsistent calling sequences for v2pack_wordimage_f, > arg 1: here integer variable, previously integer*2 variable. > readpack_word: > readpack_long: > imsiz: > pack_f.f:108:24: warning: incompatible pointer types passing 'integer *' (aka > 'long *') to parameter of type 'short *' > [-Wincompatible-pointer-types] > pack_wordimage_f__(&data[data_offset], x, y, filnarray); > ^~~~~~~~~~~~~~~~~~ > pack_f.f:140:26: warning: incompatible pointer types passing 'integer *' (aka > 'long *') to parameter of type 'short *' > [-Wincompatible-pointer-types] > v2pack_wordimage_f__(&data[data_offset], x, y, filnarray); > ^~~~~~~~~~~~~~~~~~ > 2 warnings generated. > libtool: compile: fort77 -g -O2 -c pack_f.f -o pack_f.o >/dev/null 2>&1 > /bin/sh ../libtool --tag=F77 --mode=link fort77 -g -O2 -version-info 0:0:0 > -L/sw/lib/gcc4.8/lib -L/sw/lib -L/usr/lib -o libgpp4f.la -rpath /sw/lib > libgpp4f_la-ccp4_diskio_f.lo libgpp4f_la-ccp4_parser_f.lo > libgpp4f_la-cmaplib_f.lo libgpp4f_la-csymlib_f.lo > libgpp4f_la-ccp4_general_f.lo libgpp4f_la-ccp4_unitcell_f.lo > libgpp4f_la-cmtzlib_f.lo libgpp4f_la-library_f.lo ccplib.lo fftlib.lo > modlib.lo parser.lo rwbrook.lo libhtml.lo keyparse.lo unix.lo dna_output.lo > pack_f.lo ../src/libgpp4.la -L/sw/lib -L/sw/lib/gcc4.8/lib' -lm > /bin/sh: -c: line 0: unexpected EOF while looking for matching `'' > /bin/sh: -c: line 1: syntax error: unexpected end of file > make[1]: *** [libgpp4f.la] Error 2 > make: *** [all-recursive] Error 1 > ### execution of /tmp/fink.MuEoB failed, exit code 2 > ### execution of /tmp/fink.sYIlZ failed, exit code 2 > Removing runtime build-lock... > Removing build-lock package... > /sw/bin/dpkg-lockwait -r fink-buildlock-gpp4-1.2.0-32 > (Reading database ... 84225 files and directories currently installed.) > Removing fink-buildlock-gpp4-1.2.0-32 ... > Failed: phase compiling: gpp4-1.2.0-32 failed > > > > > > > Dr. Jonathan M. Grimes, > NDM Senior Reseach Fellow > University Research Lecturer > DIAMOND Research Fellow > > Division of Structural Biology > Wellcome Trust Centre for Human Genetics > University of Oxford > Roosevelt Drive, > Oxford OX3 7BN, UK > > Email: [email protected], Web: www.strubi.ox.ac.uk > [email protected] > > Tel: (+44) - 1865 - 287561, FAX: (+44) - 1865 - 287547 > > > ------------------------------------------------------------------------------ This SF.net email is sponsored by Windows: Build for Windows Store. http://p.sf.net/sfu/windows-dev2dev _______________________________________________ Fink-users mailing list [email protected] List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
