I tried to install this and got :
Scanning dependencies of target Fingerprints_static
[ 70%] Building CXX object 
Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/Fingerprints.cpp.o
[ 70%] Building CXX object 
Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/PatternFingerprints.cpp.o
[ 71%] Building CXX object 
Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/MorganFingerprints.cpp.o
[ 71%] Building CXX object 
Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/AtomPairs.cpp.o
[ 71%] Building CXX object 
Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/MACCS.cpp.o
Linking CXX static library libFingerprints_static.a
[ 71%] Built target Fingerprints_static
Scanning dependencies of target testFingerprints
[ 71%] Building CXX object 
Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o
/sw/src/fink.build/rdkit-2013.06.1-4/RDKit_2013_06_1/Code/GraphMol/Fingerprints/test1.cpp:2413:
 error: integer constant is too large for 'long' type
/sw/src/fink.build/rdkit-2013.06.1-4/RDKit_2013_06_1/Code/GraphMol/Fingerprints/test1.cpp:2414:
 error: integer constant is too large for 'long' type
make[2]: *** 
[Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o] Error 1
make[1]: *** [Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/all] 
Error 2
make: *** [all] Error 2
### execution of /tmp/fink.MiMnM failed, exit code 2
### execution of /tmp/fink.9LERS failed, exit code 2
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-rdkit-2013.06.1-4
(Reading database ... 479934 files and directories currently installed.)
Removing fink-buildlock-rdkit-2013.06.1-4 ...
Reading buildlock packages...
/sw/bin/dpkg-lockwait -i 
/sw/fink/dists/stable/main/binary-darwin-i386/devel/boost-jam_3.1.16-1_darwin-i386.deb
Selecting previously deselected package boost-jam.
(Reading database ... 479933 files and directories currently installed.)
Unpacking boost-jam (from .../boost-jam_3.1.16-1_darwin-i386.deb) ...
Setting up boost-jam (3.1.16-1) ...

Failed: phase compiling: rdkit-2013.06.1-4 failed

Before reporting any errors, please run "fink selfupdate" and try again.

If you continue to have issues, please check to see if the FAQ on Fink's 
website solves the problem.  If not, ask on one (not both, please) of
these mailing lists:

        The Fink Users List <fink-users@lists.sourceforge.net>
        The Fink Beginners List <fink-beginn...@lists.sourceforge.net>,

with a carbon copy to the maintainer:

        W. G. Scott <wgsc...@users.sourceforge.net>

Note that this is preferable to emailing just the maintainer directly,
since most fink package maintainers do not have access to all possible
hardware and software configurations.

Please try to include the complete error message in your report.  This
generally consists of a compiler line starting with e.g. "gcc" or "g++"
followed by the actual error output from the compiler.

Also include the following system information:
Package manager version: 0.35.1
Distribution version: selfupdate-cvs Sun Sep  8 08:53:06 2013, 10.6, i386
Trees: local/main stable/main stable/crypto unstable/main unstable/crypto
Xcode.app: 3.2.6
Xcode command-line tools: 3.2.6
Max. Fink build jobs:  1
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