89-156-6-239:~ mariemeimeneelghezal$ fink install optim-atlas-oct362
Information about 8752 packages read in 1 seconds.
No packages to install.
When I check octave:1> pkg list
no packages installed.
Le 24 nov. 2013 à 23:02, Alexander Hansen-2 [via Fink] a écrit :
> On 11/24/13 1:57 PM, marieme imene wrote:
>
> > Hello and thanks for caring,
> > I'm using Mac os Lion 10.7.5. This is what I got when I tried the commands:
> >
> > Scanning package description files..........
> > Information about 8752 packages read in 13 seconds.
> > The following package will be rebuilt:
> > optim-atlas-oct362
> > Setting runtime build-lock...
> > dpkg-deb -b
> > /sw2/src/fink.build/root-fink-buildlock-optim-atlas-oct362-1.2.2-2
> > /sw2/src/fink.build
> > dpkg-deb : construction du paquet «
> > fink-buildlock-optim-atlas-oct362-1.2.2-2 » dans «
> > /sw2/src/fink.build/fink-buildlock-optim-atlas-oct362-1.2.2-2_2013.11.24-22.51.16_darwin-x86_64.deb
> >
> > ».
> > Installing build-lock package...
> > /sw2/bin/dpkg-lockwait -i
> > /sw2/src/fink.build/fink-buildlock-optim-atlas-oct362-1.2.2-2_2013.11.24-22.51.16_darwin-x86_64.deb
> >
> >
> > Selecting previously deselected package
> > fink-buildlock-optim-atlas-oct362-1.2.2-2.
> > (Reading database ... 54111 files and directories currently installed.)
> > Unpacking fink-buildlock-optim-atlas-oct362-1.2.2-2 (from
> > .../fink-buildlock-optim-atlas-oct362-1.2.2-2_2013.11.24-22.51.16_darwin-x86_64.deb)
> >
> > ...
> > Setting up fink-buildlock-optim-atlas-oct362-1.2.2-2
> > (2013.11.24-22.51.16) ...
> >
> > env LANG=C LC_ALL=C /sw2/bin/tar --no-same-owner --no-same-permissions
> > -xf /sw2/src/optim-1.2.2.tar.gz
> > /tmp/fink.r6xdF
> > #!/bin/sh -ev
> > export OCTAVE=/sw2/bin/octave-3.6.2
> > pkgsrc=optim-1.2.2
> >
> > ##### Invariant stuff begins here #####
> > /sw2/share/fink-octave-scripts/octave-forge-patch.sh optim 1.2.2 3.6.2
> > /sw2/src/fink.build/optim-atlas-oct362-1.2.2-2/optim-1.2.2
> > /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2/sw2 $pkgsrc
> > #!/bin/sh -ev
> > if [ $UID -ne 0 ]
> > then
> > echo "$1 cannot be built with --build-as-nobody"
> > exit 1
> > fi
> > octvers=$3
> > subst1="s,@PKG@,$1,g"
> > subst2="s,@PKGVERS@,$2,g"
> > subst3="s,@OCTVERS@,$octvers,g"
> > subst4="s,@BUILDDIR@,$4,g"
> > subst5="s,@INSTDIR@,$5,g"
> > subst6="s,@PKGSRC@,$6,g"
> > for scriptfile in octave-forge-install.sh octave-forge-inst \
> > octave-forge-postinst.sh
> > octave-forge-postinst \
> > octave-forge-prerm.sh
> > octave-forge-prerm; do
> > sed -e $subst1 -e $subst2 -e $subst3 -e $subst4 -e $subst5
> > /sw2/share/fink-octave-scripts/$scriptfile.in > $scriptfile
> > chmod a+x $scriptfile
> > done
> > if [[ "$octvers" > "3.4.0" ]] ; then
> >
> > oc_shell_script="/sw2/share/fink-octave-scripts/octave-forge-compile-3.4.3.sh.in"
> >
> >
> >
> > oc_oct_script="/sw2/share/fink-octave-scripts/octave-forge-comp-3.4.3.in"
> > else
> >
> > oc_shell_script="/sw2/share/fink-octave-scripts/octave-forge-compile-3.0.5.sh.in"
> >
> >
> >
> > oc_oct_script="/sw2/share/fink-octave-scripts/octave-forge-comp-3.0.5.in"
> > fi
> > sed -e $subst1 -e $subst3 -e $subst4 -e $subst6 $oc_shell_script >
> > octave-forge-compile.sh
> > sed -e $subst1 -e $subst3 -e $subst6 $oc_oct_script > octave-forge-comp
> > sed -e $subst3 -e $subst4
> > /sw2/share/fink-octave-scripts/genmkoctfile.sh.in > genmkoctfile.sh
> > chmod a+x octave-forge-comp*
> > chmod a+x genmkoctfile.sh
> > ./octave-forge-compile.sh
> > #!/bin/sh -ev
> > # repack tarball, since octave-3.4.0+ appears not to want to install
> > # from directories
> > cd ..
> > tar -cf optim.tar optim-1.2.2
> > mkdir -p bld/share/octave/3.6.2/packages bld/lib/octave/3.6.2/packages
> > `which xvfb-run`
> > /sw2/src/fink.build/optim-atlas-oct362-1.2.2-2/optim-1.2.2/octave-forge-comp
> >
> >
> > which xvfb-run
> > GNU Octave, version 3.6.2
> > Copyright (C) 2012 John W. Eaton and others.
> > This is free software; see the source code for copying conditions.
> > There is ABSOLUTELY NO WARRANTY; not even for MERCHANTABILITY or
> > FITNESS FOR A PARTICULAR PURPOSE. For details, type `warranty'.
> >
> > Octave was configured for "x86_64-apple-darwin".
> >
> > Additional information about Octave is available at http://www.octave.org.
> >
> > Please contribute if you find this software useful.
> > For more information, visit http://www.octave.org/help-wanted.html
> >
> > Read http://www.octave.org/bugs.html to learn how to submit bug reports.
> >
> > For information about changes from previous versions, type `news'.
> >
> > warning: X11 DISPLAY environment variable not set
> > executing commands from /sw2/share/octave/site/m/startup/octaverc ... done.
> > executing commands from /sw2/share/octave/3.6.2/m/startup/octaverc ...
> > done.
> >
> > ans =
> > /sw2/src/fink.build/optim-atlas-oct362-1.2.2-2/bld/share/octave/3.6.2/packages
> >
> >
> > mkdir (/var/tmp/oct-pFsBIr)
> > untar (./optim.tar, /var/tmp/oct-pFsBIr)
> > mkoctfile: stripping disabled on this platform
> > mkoctfile: stripping disabled on this platform
> > mkoctfile: stripping disabled on this platform
> > mkoctfile: stripping disabled on this platform
> > samin.cc:477:1: warning: control may reach end of non-void function
> > [-Wreturn-type]
> > }
> > ^
> > 1 warning generated.
> > mkoctfile: stripping disabled on this platform
> > LFLAGS="-L/sw2/lib/octave/3.6.2 -L/sw2/lib -ltatlas -ltatlas"
> > /sw2/bin/mkoctfile-3.6.2 -s __bfgsmin.cc
> > LFLAGS="-L/sw2/lib/octave/3.6.2 -L/sw2/lib -ltatlas -ltatlas"
> > /sw2/bin/mkoctfile-3.6.2 -s numgradient.cc
> > LFLAGS="-L/sw2/lib/octave/3.6.2 -L/sw2/lib -ltatlas -ltatlas"
> > /sw2/bin/mkoctfile-3.6.2 -s numhessian.cc
> > LFLAGS="-L/sw2/lib/octave/3.6.2 -L/sw2/lib -ltatlas -ltatlas"
> > /sw2/bin/mkoctfile-3.6.2 -s samin.cc
> > LFLAGS="-L/sw2/lib/octave/3.6.2 -L/sw2/lib -ltatlas -ltatlas"
> > /sw2/bin/mkoctfile-3.6.2 -s __disna_optim__.cc
> > copyfile /var/tmp/oct-pFsBIr/optim-1.2.2/src/__bfgsmin.oct
> > /var/tmp/oct-pFsBIr/optim-1.2.2/src/__disna_optim__.oct
> > /var/tmp/oct-pFsBIr/optim-1.2.2/src/numgradient.oct
> > /var/tmp/oct-pFsBIr/optim-1.2.2/src/numhessian.oct
> > /var/tmp/oct-pFsBIr/optim-1.2.2/src/samin.oct
> > /var/tmp/oct-pFsBIr/optim-1.2.2/inst/x86_64-apple-darwin-api-v48+
> > warning: gen_doc_cache: unusable help text found in file 'test_d2_min_1'
> > warning: gen_doc_cache: unusable help text found in file 'test_d2_min_2'
> > warning: gen_doc_cache: unusable help text found in file 'test_d2_min_3'
> > /var/tmp/octave-help-hVcd9z:64: must be after `@deftypefn' to use
> > `@deftypefnx'
> > /var/tmp/octave-help-hVcd9z:72: must be after `@deftypefn' to use
> > `@deftypefnx'
> > /var/tmp/octave-help-hVcd9z:85: must be after `@deftypefn' to use
> > `@deftypefnx'
> > For information about changes from previous versions of the optim
> > package, run 'news ("optim")'.
> > /bin/rm -rf /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2
> > /bin/mkdir -p /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2/sw2
> > /bin/mkdir -p /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2/DEBIAN
> > /usr/sbin/chown -R root:admin
> > /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2
> > ./octave-forge-install.sh
> > #!/bin/sh -ev
> > cd /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2/sw2
> > cp -r
> > /sw2/src/fink.build/optim-atlas-oct362-1.2.2-2/optim-1.2.2/../bld/{share,lib}
> >
> > .
> > `which xvfb-run`
> > /sw2/src/fink.build/optim-atlas-oct362-1.2.2-2/optim-1.2.2/octave-forge-inst
> >
> >
> > which xvfb-run
> > warning: X11 DISPLAY environment variable not set
> > mv share/octave/3.6.2/octave_packages
> > share/octave/3.6.2/packages/optim-1.2.2/.
> > mkdir -p share/octave/3.6.2/optim
> > # copy postinst/prerm scripts
> > cp
> > /sw2/src/fink.build/optim-atlas-oct362-1.2.2-2/optim-1.2.2/octave-forge-{prerm,postinst,prerm.sh,postinst.sh}
> >
> > /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2/sw2/share/octave/3.6.2/optim
> >
> >
> > /bin/rm -f
> > /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2/sw2/info/dir
> > /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2/sw2/info/dir.old
> > /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2/sw2/share/info/dir
> > /sw2/src/fink.build/root-optim-atlas-oct362-1.2.2-2/sw2/share/info/dir.old
> > Writing control file...
> > Writing package script postinst...
> > Writing package script prerm...
> > Writing md5sums file...
> > env LANG=C LC_ALL=C dpkg-deb -b root-optim-atlas-oct362-1.2.2-2
> > /sw2/fink/10.7/stable/main/binary-darwin-x86_64/sci
> > dpkg-deb: building package `optim-atlas-oct362' in
> > `/sw2/fink/10.7/stable/main/binary-darwin-x86_64/sci/optim-atlas-oct362_1.2.2-2_darwin-x86_64.deb'.
> >
> >
> > Removing runtime build-lock...
> > Removing build-lock package...
> > /sw2/bin/dpkg-lockwait -r fink-buildlock-optim-atlas-oct362-1.2.2-2
> > (Reading database ... 54112 files and directories currently installed.)
> > Removing fink-buildlock-optim-atlas-oct362-1.2.2-2 ...
> > Reading buildlock packages...
> > /sw2/bin/dpkg-lockwait -i
> > /sw2/fink/dists/stable/main/binary-darwin-x86_64/sci/optim-atlas-oct362_1.2.2-2_darwin-x86_64.deb
> >
> >
> > (Reading database ... 54111 files and directories currently installed.)
> > Preparing to replace optim-atlas-oct362 1.2.2-2 (using
> > .../optim-atlas-oct362_1.2.2-2_darwin-x86_64.deb) ...
> > Unregistering optim package with Octave-3.6.2...
> > Done.
> > Unpacking replacement optim-atlas-oct362 ...
> > Setting up optim-atlas-oct362 (1.2.2-2) ...
> > Registering optim package with Octave-3.6.2...Done.
> >
> > Updating the list of locally available binary packages.
> > Scanning dists/stable/main/binary-darwin-x86_64
> > Changed package:
> > dists/stable/main/binary-darwin-x86_64/sci/optim-atlas-oct362_1.2.2-2_darwin-x86_64.deb
> >
> >
> > 89-156-6-239:~ mariemeimeneelghezal$ fink install octave-atlas362
> > Information about 8752 packages read in 1 seconds.
> > Failed: no package found for specification 'octave-atlas362'!
> >
> > Thanks again!
> > Le 24 nov. 2013 à 22:51, Alexander Hansen-2 [via Fink] a écrit :
> >
> > > fink install octave-atlas362
> >
> >
>
>
> Oh, sorry, my fault there. I meant to have you try to run "fink install
> optim-atlas-oct362" , but the rebuild took care of that.
>
> Check your "pkg list" in octave.
> --
> Alexander Hansen, Ph.D.
> Fink User Liaison
> My package updates: http://finkakh.wordpress.com/
>
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