On 23.06.2014, at 10:11, domi...@lps.ens.fr (Dominique Dhumieres) wrote:
> h5py/h5fd.c:1018:39: error: use of undeclared identifier 'H5FD_MPIPOSIX'
> __pyx_t_1 = __Pyx_PyInt_to_py_hid_t(H5FD_MPIPOSIX); if
> (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 34;
> __pyx_cl...
> ^
> 1 warning and 1 error generated.
> error: command 'gcc' failed with exit status 1
> ### execution of /sw64/bin/python3.4 failed, exit code 1
> ### execution of /tmp/fink.ZrO4J failed, exit code 1
> Removing runtime build-lock...
> Removing build-lock package...
> /sw64/bin/dpkg-lockwait -r fink-buildlock-h5py-py34-2.3.0-2
> (Reading database ... 335492 files and directories currently installed.)
> Removing fink-buildlock-h5py-py34-2.3.0-2 ...
> Failed: phase compiling: h5py-py34-2.3.0-2 failed
Just discussed this on the devel list: there's an incompatibility with
hdf5.8-18 that's been fixed in the .pyx/.pxd files, but not in the generated
h5fd.c.
If you install cython-py34, it should work for now.
Cheers,
Derek
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