> On Feb 23, 2017, at 21:13, Sylvain Barbot <sylbar.vain...@gmail.com> wrote: > > Dear All, > > I get errors while compiling and installing the atlas library. > > fink install atlas > > cp -f GEN/* /sw/src/fink.build/atlas-3.10.2-3/darwin_bld/src/blas/level1/. > /Applications/Xcode.app/Contents/Developer/usr/bin/make -f Make_zaxpy lib > /sw/src/fink.build/atlas-3.10.2-3/opt-bin/gcc -DL2SIZE=4194304 > -I/sw/src/fink.build/atlas-3.10.2-3/darwin_bld/include > -I/sw/src/fink.build/atlas-3.10.2-3/darwin_bld/../ATLAS//include > -I/sw/src/fink.build/atlas-3.10.2-3/darwin_bld/../ATLAS//include/contrib > -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX > -DATL_ARCH_Corei2 -DATL_CPUMHZ=2900 -DATL_AVX -DATL_SSE3 -DATL_SSE2 > -DATL_SSE1 -DATL_USE64BITS -DATL_GAS_x8664 -m64 -DATL_DYLIBS > -DATL_FULL_LAPACK -DATL_NCPU=4 -fPIC -fomit-frame-pointer -O3 -m64 > -mfpmath=sse -m64 -fPIC -DDCPLX -o ATL_zaxpy.o -c ATL_zaxpy.c > gcc-fsf-5 -fPIC -fomit-frame-pointer -O3 -m64 -mfpmath=sse -m64 -fPIC > -x assembler-with-cpp -DL2SIZE=4194304 > -I/sw/src/fink.build/atlas-3.10.2-3/darwin_bld/include > -I/sw/src/fink.build/atlas-3.10.2-3/darwin_bld/../ATLAS//include > -I/sw/src/fink.build/atlas-3.10.2-3/darwin_bld/../ATLAS//include/contrib > -DAdd_ -DF77_INTEGER=int -DStringSunStyle -DATL_OS_OSX > -DATL_ARCH_Corei2 -DATL_CPUMHZ=2900 -DATL_AVX -DATL_SSE3 -DATL_SSE2 > -DATL_SSE1 -DATL_USE64BITS -DATL_GAS_x8664 -m64 -DATL_DYLIBS > -DATL_FULL_LAPACK -DATL_NCPU=4 -DDCPLX -o ATL_zaxpy_xp1yp1aXbX.o -c > ATL_zaxpy_xp1yp1aXbX.c > ATL_zaxpy_xp1yp1aXbX.c:112:no such instruction: `vbroadcastsd 8(%rsi), %ymm1' > ATL_zaxpy_xp1yp1aXbX.c:113:no such instruction: `vbroadcastsd -8(%rsp), %ymm0' > ATL_zaxpy_xp1yp1aXbX.c:114:no such instruction: `vblendpd $0x5, > %ymm0,%ymm1,%ymm1' > ATL_zaxpy_xp1yp1aXbX.c:115:no such instruction: `vbroadcastsd (%rsi), %ymm0' > ATL_zaxpy_xp1yp1aXbX.c:151:no such instruction: `vmovapd (%rdx,%rax), %ymm3' > ATL_zaxpy_xp1yp1aXbX.c:152:no such instruction: `vshufpd $0x5, > %ymm3,%ymm3,%ymm4' > ATL_zaxpy_xp1yp1aXbX.c:153:no such instruction: `vmulpd %ymm0, %ymm3,%ymm3' > ATL_zaxpy_xp1yp1aXbX.c:154:no such instruction: `vaddpd (%rcx,%rax), > %ymm3,%ymm2' > ATL_zaxpy_xp1yp1aXbX.c:156:no such instruction: `vmulpd %ymm1, %ymm4,%ymm4' > ATL_zaxpy_xp1yp1aXbX.c:157:no such instruction: `vaddpd %ymm4, %ymm2,%ymm2' > ATL_zaxpy_xp1yp1aXbX.c:159:no such instruction: `vmovapd %ymm2, (%rcx,%rax)' > ATL_zaxpy_xp1yp1aXbX.c:174:no such instruction: `vmovupd (%rdx,%rax), %ymm3' > ATL_zaxpy_xp1yp1aXbX.c:175:no such instruction: `vshufpd $0x5, > %ymm3,%ymm3,%ymm4' > ATL_zaxpy_xp1yp1aXbX.c:176:no such instruction: `vmulpd %ymm0, %ymm3,%ymm3' > ATL_zaxpy_xp1yp1aXbX.c:177:no such instruction: `vaddpd (%rcx,%rax), > %ymm3,%ymm2' > ATL_zaxpy_xp1yp1aXbX.c:179:no such instruction: `vmulpd %ymm1, %ymm4,%ymm4' > ATL_zaxpy_xp1yp1aXbX.c:180:no such instruction: `vaddpd %ymm4, %ymm2,%ymm2' > ATL_zaxpy_xp1yp1aXbX.c:182:no such instruction: `vmovapd %ymm2, (%rcx,%rax)' > ATL_zaxpy_xp1yp1aXbX.c:199:no such instruction: `vmovupd (%rdx,%rax), %ymm3' > ATL_zaxpy_xp1yp1aXbX.c:200:no such instruction: `vshufpd $0x5, > %ymm3,%ymm3,%ymm4' > ATL_zaxpy_xp1yp1aXbX.c:201:no such instruction: `vmovupd (%rcx,%rax), %ymm2' > ATL_zaxpy_xp1yp1aXbX.c:202:no such instruction: `vmulpd %ymm0, %ymm3,%ymm3' > ATL_zaxpy_xp1yp1aXbX.c:203:no such instruction: `vaddpd %ymm3, %ymm2,%ymm2' > ATL_zaxpy_xp1yp1aXbX.c:205:no such instruction: `vmulpd %ymm1, %ymm4,%ymm4' > ATL_zaxpy_xp1yp1aXbX.c:206:no such instruction: `vaddpd %ymm4, %ymm2,%ymm2' > ATL_zaxpy_xp1yp1aXbX.c:208:no such instruction: `vmovupd %ymm2, (%rcx,%rax)' > make[6]: *** [ATL_zaxpy_xp1yp1aXbX.o] Error 1 > make[5]: *** [zgen] Error 2 > make[4]: *** [zlib] Error 2 > make[3]: *** [lib.grd] Error 2 > make[2]: *** [IStage1] Error 2 > ERROR 703 DURING CACHESIZE SEARCH!!. CHECK INSTALL_LOG/Stage1.log FOR > DETAILS. > cd /sw/src/fink.build/atlas-3.10.2-3/darwin_bld ; > /Applications/Xcode.app/Contents/Developer/usr/bin/make error_report > /Applications/Xcode.app/Contents/Developer/usr/bin/make -f Make.top > error_report > uname -a 2>&1 >> bin/INSTALL_LOG/ERROR.LOG > /sw/src/fink.build/atlas-3.10.2-3/opt-bin/gcc -v 2>&1 >> > bin/INSTALL_LOG/ERROR.LOG > Using built-in specs. > COLLECT_GCC=/sw/src/fink.build/atlas-3.10.2-3/opt-bin/gcc > COLLECT_LTO_WRAPPER=/sw/lib/gcc5/libexec/gcc/x86_64-apple-darwin13.4.0/5.4.0/lto-wrapper > Target: x86_64-apple-darwin13.4.0 > Configured with: ../gcc-5.4.0/configure --prefix=/sw > --prefix=/sw/lib/gcc5 --mandir=/sw/share/man > --infodir=/sw/lib/gcc5/info > --enable-languages=c,c++,fortran,lto,objc,obj-c++,java --with-gmp=/sw > --with-libiconv-prefix=/sw --with-isl=/sw --with-mpc=/sw > --with-system-zlib --program-suffix=-fsf-5 > Thread model: posix > gcc version 5.4.0 (GCC) > /sw/src/fink.build/atlas-3.10.2-3/opt-bin/gcc -V 2>&1 >> > bin/INSTALL_LOG/ERROR.LOG > gcc: error: unrecognized command line option '-V' > gcc: fatal error: no input files > compilation terminated. > make[4]: [error_report] Error 1 (ignored) > /sw/src/fink.build/atlas-3.10.2-3/opt-bin/gcc --version 2>&1 >> > bin/INSTALL_LOG/ERROR.LOG > tar cf error_Corei264AVX.tar Make.inc bin/INSTALL_LOG/* > bzip2 error_Corei264AVX.tar > Error report error_<ARCH>.tgz has been created in your top-level ATLAS > directory. Be sure to include this file in any help request. > cat: ../../CONFIG/error.txt: No such file or directory > cat: ../../CONFIG/error.txt: No such file or directory > make[1]: *** [build] Error 255 > make: *** [build] Error 2 > ### execution of /tmp/fink.iIQZ6 failed, exit code 2 > ### execution of /tmp/fink.xspc5 failed, exit code 2 > Removing runtime build-lock... > Removing build-lock package... > /sw/bin/dpkg-lockwait -r fink-buildlock-atlas-3.10.2-3 > (Reading database ... 192286 files and directories currently installed.) > Removing fink-buildlock-atlas-3.10.2-3 ... > Failed: phase compiling: atlas-3.10.2-3 failed > Before reporting any errors, please run "fink selfupdate" and try again. > > If you continue to have issues, please check to see if the FAQ on Fink's > website solves the problem. If not, ask on one (not both, please) of > these mailing lists: > > The Fink Users List <fink-users@lists.sourceforge.net> > The Fink Beginners List <fink-beginn...@lists.sourceforge.net>. > > Please try to include the complete error message in your report. This > generally consists of a compiler line starting with e.g. "gcc" or "g++" > followed by the actual error output from the compiler. > > Also include the following system information: > Package manager version: 0.41.1 > Distribution version: selfupdate-rsync Thu Feb 23 22:41:48 2017, 10.9, x86_64 > Trees: local/main stable/main > Xcode.app: 6.2 > Xcode command-line tools: 6.2.0.0.1.1424975374 > atlas-3.10.2-3 is set to build with only one job. > > > Thank you for your feedback. > Sylvain
Sorry, I can’t help test this. I only have 10.9 on a VMware image, and atlas didn't build on that when I tried it last. \ What hardware are you using (e.g. from “sysctl hw.model)? Atlas is very sensitive to the details of the hardware. -- Alexander Hansen, Ph.D. Fink User Liaison ------------------------------------------------------------------------------ Check out the vibrant tech community on one of the world's most engaging tech sites, SlashDot.org! http://sdm.link/slashdot _______________________________________________ Fink-users mailing list Fink-users@lists.sourceforge.net List archive: https://sourceforge.net/p/fink/mailman/fink-users/ Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
