Hi,I am trying to install fipy on my desktop running debian lenny, but it failed at the testing stage. I have installed numpy, python-sparse (pysparse in debian) and python-matplotlib. Running the command python setup.py test gives me the following messages, with the error message at the end.
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running test running egg_info writing FiPy.egg-info/PKG-INFO writing top-level names to FiPy.egg-info/top_level.txt writing dependency_links to FiPy.egg-info/dependency_links.txt writing entry points to FiPy.egg-info/entry_points.txt reading manifest file 'FiPy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'FiPy.egg-info/SOURCES.txt' running build_ext import fipy.solvers.test ... ok import fipy.models.test ... ok import fipy.terms.test ... ok import fipy.tools.test ... ok import fipy.meshes.test ... ok import fipy.variables.test ... ok import fipy.viewers.test ... ok import fipy.boundaryConditions.test ... ok import fipy.models.levelSet.test ... ok import fipy.models.levelSet.electroChem.test ... ok import fipy.models.levelSet.advection.advectionTerm ... ok import fipy.models.levelSet.advection.higherOrderAdvectionTerm ... ok import fipy.models.levelSet.distanceFunction.distanceVariable ... ok import fipy.models.levelSet.surfactant.surfactantVariable ... okimport fipy.models.levelSet.distanceFunction.levelSetDiffusionVariable .. ok
import fipy.models.levelSet.surfactant.adsorbingSurfactantEquation ... ok import fipy.models.levelSet.surfactant.convectionCoeff ... ok import fipy.models.levelSet.surfactant.lines ... ok import fipy.models.levelSet.electroChem.metalIonSourceVariable ... ok import fipy.models.levelSet.electroChem.metalIonDiffusionEquation ... ok import fipy.models.levelSet.electroChem.gapFillMesh ... okDoctest: fipy.models.levelSet.electroChem.metalIonSourceVariable._MetalIonSourceVariable .. ok Doctest: fipy.models.levelSet.electroChem.metalIonDiffusionEquation.buildMetalIonDiffusionEquation .. ok Doctest: fipy.models.levelSet.electroChem.gapFillMesh.GapFillMesh ... sh: gmsh: command not found
FAILDoctest: fipy.models.levelSet.electroChem.gapFillMesh.TrenchMesh ... sh: gmsh: command not found
FAIL Doctest: fipy.models.levelSet.advection.advectionTerm._AdvectionTerm ... okDoctest: fipy.models.levelSet.advection.higherOrderAdvectionTerm._HigherOrderAdvectionTerm .. ok Doctest: fipy.models.levelSet.distanceFunction.distanceVariable.DistanceVariable .. ok Doctest: fipy.models.levelSet.distanceFunction.distanceVariable.DistanceVariable._getCellInterfaceFlag .. ok Doctest: fipy.models.levelSet.distanceFunction.distanceVariable.DistanceVariable._getCellInterfaceNormals .. ok Doctest: fipy.models.levelSet.distanceFunction.distanceVariable.DistanceVariable._getCellValueOverFaces .. ok Doctest: fipy.models.levelSet.distanceFunction.distanceVariable.DistanceVariable._getInterfaceFlag .. ok Doctest: fipy.models.levelSet.distanceFunction.distanceVariable.DistanceVariable._getInterfaceNormals .. ok Doctest: fipy.models.levelSet.distanceFunction.distanceVariable.DistanceVariable._getLevelSetNormals .. ok Doctest: fipy.models.levelSet.distanceFunction.distanceVariable.DistanceVariable.getCellInterfaceAreas .. ok Doctest: fipy.models.levelSet.surfactant.surfactantVariable.SurfactantVariable.__init__ .. ok Doctest: fipy.models.levelSet.distanceFunction.levelSetDiffusionVariable._LevelSetDiffusionVariable .. ok Doctest: fipy.models.levelSet.surfactant.adsorbingSurfactantEquation.AdsorbingSurfactantEquation .. Segmentation fault
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Any input will be appreciated! Qingshan
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