> > 2. I followed the given advise and ran the simulation under fixed
> boundary conditions and, as shown in the video attachment (s-cd2d), the
> bivariate solution convects without noticeable edge effect. However, I do
> wonder if another solution is to keep the fixed flux but implement a
> conservational constraint on the probability density function, rendering
> the integration of the solutions across the 2D domain equaling unity? If
> so, how would one go about inserting this condition into the solver?
>
> But if the peak is advecting out of the domain, then it is not conserved.
>
> Makes sense. And if I were to multiply the convection term by tanh(x) with
x being the position vector, which then will generate a fixed pt at (0,0),
how would I ensure conservation? In other words, albeit it's a 1-D example,
how do I enforce the total area under the probability density function
in s-cd1dx.mp4
from last email to equal 1?

>
> > *Staring at the convecting bivariate distribution some more, I noticed a
> bright blue band on the outer periphery of the central solutions. This
> struck me as odd since, based on the colorbar scheme, it seems to suggest
> that my circular normal distribution has a peak at a far radius before the
> curve drops down again.. Matplotlib anomaly perhaps? Any explanation would
> help.
>
> I believe that is an artifact of the Matplotlib color scheme.


Playing around with the cmap more seems to fix it. Thanks!

>
> > 3. I'm glad to report the irregular cropping behavior in
> MatplotlibViewer and am looking forward to the bugfix. However, when I
> tried calling Matplotlib2DViewer instead using the script in
> http://matforge.org/fipy/ticket/444, I get a
> >
> > NameError: name 'Matplotlib2DViewer' is not defined
>
>
> What version of FiPy are you running? As far as I can tell,
> Matplotlib2DViewer has been imported by `from fipy import *` for about six
> years.


The current FiPy I'm running is FiPy-2.2_dev5124


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-- 
Graduate Group of Ecology Doctoral Candidate
Department of Environmental Science and Policy
Center for Population Biology
University of California, Davis
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