I was looking at the example in the manual and getting confused by the “coeff=“ 
term. Thought it meant that you could specify both S0 and S1 in the same 
argument, something like this:
ImplicitSourceTerm(S0,coeff=S1). So I was puzzled as to why the 3*kappa**2 term 
was outside the argument. Now it makes better sense. Thanks!

Richard

On Jan 24, 2015, at 11:05 AM, <[email protected]> 
<[email protected]> wrote:

> Implicitsourceterm multiplies scalarsource by the dependent variable.
> 
> http://www.ctcms.nist.gov/fipy/documentation/numerical/discret.html#source-term
> 
> Kris
> -----Original Message-----
> From: Richard Gillilan <[email protected]>
> Sender: <[email protected]>
> Date: Sat, 24 Jan 2015 15:48:40 
> To: [email protected]<[email protected]>
> Reply-To: <[email protected]>
> Subject: Solved! hints on creating a Source in simple convection diffusion
>       problem
> 
> Ah ha! 
> 
> It seems the solution was to replace "ImplicitSourceTerm(scalarSource)"
> with just “scalarSource”.
> 
> So, I apparently don’t understand the difference between an implicit and 
> explicit source. 
> 
> Anyone care to clarify?
> 
> Richard
> 
> On Jan 23, 2015, at 3:49 PM, Richard Gillilan <[email protected]> wrote:
> 
>> Doing simple convection diffusion in a narrow channel: simulating the 
>> accumulation of damaged solute in a dilute solution as a result of x-ray 
>> exposure. I’m having trouble getting a Source term to work the way I think 
>> it should. I want a strip of volume elements in the middle of the channel 
>> (the x-ray illuminated volume) to act as a source of “damaged” solute. So 
>> any solution that convects into those pixels should have the concentration 
>> of damaged material increased at a constant rate. Note vel is simple 
>> Poiseuille flow, but set to zero for testing purposes. 
>> 
>> Can anyone spot any obvious errors? Here’s what I tried:
>> 
>> <I’m only showing some of the code here for brevity>
>> 
>> print "volume element size: ",dx,"x",dy
>> 
>> Lx = dx*nx
>> Ly = dy*ny
>> 
>> mesh = Grid2D(dx=dx, dy=dy, nx=nx, ny=ny)
>> 
>> print "dimensions of capillary: ",Lx,Ly
>> ...
>> xc,yx = mesh.cellCenters
>> ...
>> scalarSource = CellVariable(mesh, value=0.0, rank=0)
>> strip = ((xc>Lx/3) & (xc<2*Lx/3))
>> scalarSource.setValue([100.0], where=strip) 
>> 
>> eq = TransientTerm() == 
>> (DiffusionTerm(coeff=D)+VanLeerConvectionTerm(coeff=vel))+ImplicitSourceTerm(scalarSource)
> 
> 
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