Trevor, Are your previous build instructions still current? Just wondering if I can reproduce either of these outcomes?
Dan On Dec 2, 2016, at 11:39 AM, Keller, Trevor (Fed) <[email protected]> wrote: > Hi Shaun, > > I am unable to reproduce this error in my environment, using FiPy version > 3.1.dev134+g64f7866 and PyTrilinos version12.3;(;Dev;). Here's the output I > get: > > $ mpirun -np 1 python examples/cahnHilliard/mesh2DCoupled.py --trilinos > .../lib/python2.7/site-packages/matplotlib/collections.py:590: FutureWarning: > elementwise comparison failed; returning scalar instead, but in the future > will perform elementwise comparison > if self._edgecolors == str('face'): > > Coupled equations. Press <return> to proceed... > False > > Does the example successfully run for you without Trilinos? without MPI? This > looks like a build environment problem, but I'm not sure exactly where. > > Trevor > From: [email protected] <[email protected]> on behalf of Shaun Mucalo > <[email protected]> > Sent: Thursday, December 1, 2016 7:37:34 PM > To: FIPY > Subject: Fwd: trilinos solver error > > > > Hello, > I am trying to solve a problem with fipy using trilinos > solvers. However, when I run a problem with a 2D mesh I get the > following trilinos error: > > > $ python fipy/examples/cahnHilliard/mesh2DCoupled.py --trilinos > Error in dorgqr on 0 row (dims are 800, 1) > > Error in CoarsenMIS: dorgqr returned a non-zero > n-------------------------------------------------------------------------- > MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD > with errorcode 1. > > NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. > You may or may not see output from other processes, depending on > exactly when Open MPI kills them. > -------------------------------------------------------------------------- > > > I get a similar error when running the doctests (output of "mpirun -np 1 > python setup.py test --trilinos" is attached). I have manually tested > ~20 of the examples, it appears the 1D cases work fine and fail on the > 2D cases, for any value of -np. > > Incidentally, running the tests at -np > 1 and the tests stall at > "Doctest:fipy.terms.abstractDiffusionTerm._AbstractDiffusionTerm._buildMatrix...". > I am not sure if this is related. > > Does anyone have any advice? Is this unique to my installation, or is it > a known issue? Please let me know if there is any other information I > can provide that could be useful. > > Regards, > Shaun Mucalo > _______________________________________________ > fipy mailing list > [email protected] > http://www.ctcms.nist.gov/fipy > [ NIST internal ONLY: https://email.nist.gov/mailman/listinfo/fipy ] _______________________________________________ fipy mailing list [email protected] http://www.ctcms.nist.gov/fipy [ NIST internal ONLY: https://email.nist.gov/mailman/listinfo/fipy ]
