Dear Pedro, dear colleagues,

Thank you for this announcement. 

I make a comment below based on the abstract of the conference:



> On 11 Jan 2018, at 13:28, Pedro C. Marijuan <pcmarijuan.i...@aragon.es> wrote:
> 
> 
>  Dear FISers, this Conference in Code Biology may be of interest to some 
> parties. It will be in beautiful Granada (Spain), next June. Although the 
> deadline for abstract submission is too close, there would be a longer term 
> if requested to the organizers. 
> I hpe to see you there. Best--Pedro
> ------------------------------------------------------------------------------------------------------
> 
> 
> Fifth International Conference in Code Biology
> 
> 
>  
>  
> Call for Papers 
>   
> The International Conferences in Code Biology aim at bringing together 
> scholars and researchers who are interested in the study of all codes of 
> life, from the genetic code to the codes of culture.  
>  
> The Fifth International Conference in Code Biology will take place in Granada 
> (Spain) from 5 to 9 June 2018. The Conference will host individual talks, 
> poster sessions, a roundtable discussion and the Annual General Assembly of 
> the Code Biology Society.
>  
> People who wish to deliver individual talks are invited to email an Abstract 
> of between 200-500 words to  granada-abstra...@codebiology.org 
> <mailto:granada-abstra...@codebiology.org>
> Abstracts should be sent as one-page files written in a format such as  .doc 
> or  .rtf  (no PDF please). 
>  
> The deadline for Abstract submission is  15 January 2018.
> Earlier submission is highly recommended.
>  
> More details are available in the Conference homepage 
> http://www.codebiology.org/conferences/Granada2018/ 
> <http://www.codebiology.org/conferences/Granada2018/>
>  
> 


This seems *quite* interesting, not so much far from number biology (and 
psychology, and theology).

But … from: http://www.codebiology.org/conferences/Granada2018/ 
<http://www.codebiology.org/conferences/Granada2018/>

<<
Fifth International Conference in Code Biology
Granada (Spain), 5-9 June 2018

Code Biology is the study of all codes of life with the standard methods of 
science. The genetic code and the codes of culture have been known for a long 
time and represent the starting point, the historical foundation, of Code 
Biology. What is really new in this field is the study of all codes that came 
after the genetic code and before the codes of culture. Some of these new codes 
have already been discovered, and it is likely that many more will come to 
light in the future. The existence of many organic codes in Nature is not only 
a major experimental fact. It is one of those facts that have extraordinary 
theoretical implications. 
The first is that most great events of macroevolution were associated with the 
appearance of new organic codes, and this gives us a new description and a new 
understanding of the history of life.
The second theoretical implication comes from the fact that codes involve 
meaning and we need therefore to introduce in biology, again with the standard 
methods of science, not only the concept of information but also the concept of 
meaning. 
The third theoretical implication comes from the fact that the organic codes 
have been highly conserved in evolution, which means that they are the great 
invariants of life, the entities that must be perpetuated while everything else 
is changing. Code Biology, in short, is bringing to light new mechanisms that 
have operated in the history of life and new fundamental concepts in 
theoretical biology.

The International Society of Code Biology (ISCB) has been founded in 2012 with 
the aim of promoting the study of all codes of life. Applications for 
membership are welcome from scholars and researchers of all disciplines, 
including biology, biophysics, biochemistry, neurosciences, psychology, 
anthropology, ecology, information theory, systems theory, linguistics, 
semiotics and philosophy.

>>

It is incredible for me that the disciplines of Logic, Mathematical Logic and 
Theoretical Computer Science, which have so many results concerning coding and 
its possible semantics (operational semantic, denotation semantics, 
connotational semantics, …) are not mentioned.

Mathematical logic is, I think, the oldest science having introduced and 
exploit the distinction between a sentence or a theory (code, number) and its 
interpretation/meaning, usually represented by some infinite subset of some 
infinite set, including many variations possible. And this without mentioning 
that a computer, (a physical or mathematical universal digital machine) 
provides a simple direct operational semantics for the coding, at the base of 
its own functioning. 

Computer science, which is born from philosophical or foundational problem in 
mathematics, where indeed Naive Set Platonism leads quickly to contradiction 
and paradoxes (cf Russell paradox) has found a universal number/machine 
associating meaning (to coding with precise mathematical semantics). 

Then with the Church-Turing thesis, we don’t need to assume less than any 
“Turing-complete” formalism. There are tuns of journal on this, like 
“Information and control” for example, and a very vast literature, always 
suggested to be used by philosophers, but the philosophers remain very shy, if 
not negative, about this. 

I am aware that some people believe that there is a net separation between the 
digital information and its treatment by digital machine, and possible non 
digital machinery. That might be the case, but I have not yet found evidences 
for this. Anyway, my work shows that the non-digitalism of nature is a 
consequence of digitalise in philosophy of mind (or cognitive science), and 
that this can be tested (and up to now the evidences are *quite* in favour of 
digitalise (of the mind, not of nature). Yet, even if digitalism is refuted 
some day, theoretical computer science remains inspiring because it does lead 
to very interesting theories on the relation between 
codes/words/formula/theories and a large sample of semantics (in fact a whole 
branch of mathematical logic “model theory” is concerned with the semantics of 
theories, seen as mathematical syntactical object). 

My own “discovery” of computer science was done through the study of molecular 
biology and molecular genetics. I was about to decide becoming a biologist when 
I discover Gödel’s theorem and his proof technic which showed me that what 
fascinated me the most in molecular biology (self-reproduction) was already 
made real and conceptually explained in arithmetic (which decides me to study 
mathematics instead of biology). 

Gödel’s arithmetization of Metamathematics illustrates (and proves) that 
arithmetic contains the means to interpret itself and to build internal 
semantics, suggesting strongly that we might not need to assume more than 
arithmetic in the fundamental studies. Then, by making the Digital Mechanist 
thesis explicit; the mind-body problem is reduced into a (testable) 
justification of the first person *appearance* of matter and physical laws from 
a special statistics on computations, seen from some special self-referential 
modes (and eventually this has been shown to work by justifying some quantum 
logical formalism as a number theoretical necessity.

Many people oppose mechanic and organic, or artificial and natural. I think 
that such a separation might very well be … artificial (and thus natural for 
the entities developing some (big) ego (and judging that their construction are 
of a nature different from the environment). 
I am open that my intuition might be wrong, but I find quite premature to 
decide it wrong at the start, and to dismiss the giant quantity of quite 
interesting work done in the digital frame. 
There is no notion of (Turing, Church) universal machine in the analog domain, 
(I am aware some are still searching for one, but it never really works). 
The universal machine, by itself is an associator of meaning to code, and this 
in a quite number of ways, from simple boolean decoding (cf Boole’s law of 
thought) to semantics à-la Tarski. In fact, all universal machines have a very 
rich “theology”, if we dare to use this term in his ancient pre-christian sense 
(where theology is the science of the ultimate truth when we understand its 
transcendental character (something the machine and formal system can do as 
Gödel foresaw and as Hilbert and Bernay (and Löb) eventually proved.

I do not defend the Mechanist hypothesis, but I use it as a tool, as it can be 
tested, and in all case we will learn something interesting on the humans. 

What is lacking in computer science is the semiotic, and that is the reason I 
participate here, to think how some semiotics can develop itself in the 
arithmetical reality. Some conversation are very interesting, but I have to dig 
deeper to get something solid on that issue. Louis Kauffman made some 
contribution which gives me hope to help in building a bridge between semantics 
(with symbols) and semiotics (based on signs, which I see as symbols having a 
proto-semantics in their shape, sort of non symbolic symbols, so to speak), 

I am doing this comment, because I feel sometimes like if there was some 
resistance to computer science, and to "mechanist philosophy" (which is closer 
to Plato than to Aristotle materialism) in this group, and I am still not sure 
why. I have realised eventually that the work of the founder of mathematical 
logic and computer science are not well known and often misunderstood, even by 
great caliber (like Penrose), and this despite the computer revolution (or 
perhaps because hidden by that revolution?). Most philosophical critics of 
Mechanism seems to use the 19th century conception of the machine, which is a 
reductionism of the type of those directly refuted by Gödel’s incompleteness.

Best regards,

Bruno






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