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Maintainer: [email protected] Log URL: http://beefy17.nyi.freebsd.org/data/main-i386-default/pb62f24f32e66_sc3a688ef4d/logs/molden-5.8.2_4,1.log Build URL: http://beefy17.nyi.freebsd.org/build.html?mastername=main-i386-default&build=pb62f24f32e66_sc3a688ef4d Log: =>> Building biology/molden build started at Thu Dec 30 01:40:04 UTC 2021 port directory: /usr/ports/biology/molden package name: molden-5.8.2_4,1 building for: FreeBSD main-i386-default-job-03 14.0-CURRENT FreeBSD 14.0-CURRENT 1400045 i386 maintained by: [email protected] Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400042 Jail OSVERSION: 1400045 Job Id: 03 !!! Jail is newer than host. (Jail: 1400045, Host: 1400042) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/sh UNAME_p=i386 UNAME_m=i386 OSVERSION=1400045 UNAME_v=FreeBSD 14.0-CURRENT 1400045 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/main-i386-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-i386-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-i386-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-i386-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for molden-5.8.2_4,1: DATA=on: Install data files DOCS=on: Build and/or install documentation ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran10" FC="gfortran10" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc10" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/molden/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/molden/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/molden/work/.cache HOME=/wrkdirs/usr/ports/biology/molden/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/molden/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran10" FC="gfortran10" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc10" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/molden/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/molden/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/molden/work/.cache HOME=/wrkdirs/usr/ports/biology/molden/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/molden/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="c c" CFLAGS="-O2 -pipe -DFREEBSD -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0 -I/usr/local/include -Wno-return-type -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc10 -L/usr/local/lib/gcc10 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -DFREEBSD -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0 -I/usr/local/include -Wno-return-type -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/molden" EXAMPLESDIR="share/examples/molden" DATADIR="share/molden" WWWDIR="www/molden" ETCDIR="etc/molden" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/molden DOCSDIR=/usr/local/share/doc/molden EXAMPLESDIR=/usr/local/share/examples/molden WWWDIR=/usr/local/www/molden ETCDIR=/usr/local/etc/molden --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CXXINTERNAL_acaad9ca=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "c++" CC_OUTPUT_921dbbb2_58173849=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_9bdba57c=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_6a4fe7f5=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_6bcac02b=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_67d20829=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_bfa62e83=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_f0b4d593=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_308abb44=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_f00456e5=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_65ad290d=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_f2776b26=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_b2657cc3=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_380987f7=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_160933ec=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_fb62803b=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" ARCH=i386 OPSYS=FreeBSD _OSRELEASE=14.0-CURRENT OSREL=14.0 OSVERSION=1400045 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License Molden accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> molden-5.8.2_4,1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.17.5.pkg [main-i386-default-job-03] Installing pkg-1.17.5... [main-i386-default-job-03] Extracting pkg-1.17.5: .......... done ===> molden-5.8.2_4,1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of molden-5.8.2_4,1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License Molden accepted by the user => molden5.8.2.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch ftp://ftp.cmbi.umcn.nl/pub/molgraph/molden/molden5.8.2.tar.gz molden5.8.2.tar.gz 5635 kB 6005 kBps 01s ===> Fetching all distfiles required by molden-5.8.2_4,1 for building =========================================================================== =======================<phase: checksum >============================ ===> License Molden accepted by the user ===> Fetching all distfiles required by molden-5.8.2_4,1 for building => SHA256 Checksum OK for molden5.8.2.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License Molden accepted by the user ===> Fetching all distfiles required by molden-5.8.2_4,1 for building ===> Extracting for molden-5.8.2_4,1 => SHA256 Checksum OK for molden5.8.2.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for molden-5.8.2_4,1 ===> Applying FreeBSD patches for molden-5.8.2_4,1 from /usr/ports/biology/molden/files =========================================================================== =======================<phase: build-depends >============================ ===> molden-5.8.2_4,1 depends on executable: gfortran10 - not found <snip> Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) espchrg.f:992:72: 992 | if (i-k) 110,120,110 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) espchrg.f:999:72: 999 | do 150 j=1,n | 1 Warning: Fortran 2018 deleted feature: Shared DO termination label 150 at (1) espchrg.f:1001:72: 1001 | if (i-k) 130,150,130 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) espchrg.f:1002:72: 1002 | 130 if (j-k) 140,150,140 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) espchrg.f:1009:72: 1009 | if (j-k) 160,170,160 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) espchrg.f:1017:72: 1017 | if (k) 260,260,200 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) espchrg.f:1019:72: 1019 | if (i-k) 230,230,210 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) espchrg.f:1027:72: 1027 | 220 a(ji)=holo | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 220 at (1) espchrg.f:1029:72: 1029 | if (j-k) 190,190,240 | 1 Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1) espchrg.f:1036:72: 1036 | 250 a(ji)=holo | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 250 at (1) gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o proxim.o proxim.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o rdgamu.o rdgamu.f rdgamu.f:972:22: 971 | call parptr(1,freq,freq,nfreq) | 2 972 | call parptr(112,frint,ramint,ihasi) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/REAL(4)). gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o plvrml.o plvrml.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o molsint.o molsint.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o runjob.o runjob.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o rdmsf.o rdmsf.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o wrmsf.o wrmsf.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o rdmolf.o rdmolf.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o adf_fun.o adf_fun.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o rotpol.o rotpol.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o extbas.o extbas.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o rdcpmd.o rdcpmd.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o eem.o eem.f eem.f:825:72: 825 | assign 30 to next | 1 Warning: Deleted feature: ASSIGN statement at (1) eem.f:830:20: 830 | 20 go to next,(30, 50, 70, 110) | 1 Warning: Deleted feature: Assigned GOTO statement at (1) eem.f:832:72: 832 | assign 50 to next | 1 Warning: Deleted feature: ASSIGN statement at (1) eem.f:841:72: 841 | assign 70 to next | 1 Warning: Deleted feature: ASSIGN statement at (1) eem.f:847:72: 847 | assign 110 to next | 1 Warning: Deleted feature: ASSIGN statement at (1) eem.f:883:72: 883 | 95 sum = sum + dx(j)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 95 at (1) gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o asspmf.o asspmf.f asspmf.f:131:22: 130 | call parptr(115,ewin,fdum,idum) | 2 131 | call parptr(116,fdum,fdum,npmfs) | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) asspmf.f:132:22: 130 | call parptr(115,ewin,fdum,idum) | 2 131 | call parptr(116,fdum,fdum,npmfs) 132 | call parptr(123,fdum,fdum,ipmfm) | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) asspmf.f:133:22: 130 | call parptr(115,ewin,fdum,idum) | 2 ..... 133 | call parptr(124,fdum,fdum,levcol) | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) asspmf.f:134:22: 130 | call parptr(115,ewin,fdum,idum) | 2 ..... 134 | call parptr(125,fdum,fdum,ipmfh) | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) asspmf.f:1284:28: 130 | call parptr(115,ewin,fdum,idum) | 2 ..... 1284 | call parptr(117,pmfmn,pmfmx,npmfmx) | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1) asspmf.f:1285:22: 130 | call parptr(115,ewin,fdum,idum) | 2 ..... 1285 | call parptr(118,fdum,fdum,ipmfmn) | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) asspmf.f:1286:22: 130 | call parptr(115,ewin,fdum,idum) | 2 ..... 1286 | call parptr(119,fdum,fdum,ipmfmx) | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) asspmf.f:1287:22: 130 | call parptr(115,ewin,fdum,idum) | 2 ..... 1287 | call parptr(120,pmflga,fdum,idum) | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar) gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o srfcal.o srfcal.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o rdqchm.o rdqchm.f rdqchm.f:634:22: 633 | call parptr(1,freq,freq,nfreq) | 2 634 | call parptr(112,frint,ramint,ihasi) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/REAL(4)). gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o rdorca.o rdorca.f rdorca.f:750:22: 749 | call parptr(1,freq,freq,nfreq) | 2 750 | call parptr(112,frint,ramint,ihasi) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/REAL(4)). gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o rdmaux.o rdmaux.f gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o rdnwch.o rdnwch.f rdnwch.f:883:22: 882 | call parptr(1,freq,freq,nfreq) | 2 883 | call parptr(112,frint,ramint,ihasi) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(8)/REAL(4)). gfortran10 -O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch -c -o mpdum.o mpdum.f cc -O2 -pipe -DFREEBSD -DDOBACK -DHASTIMER -DCOLOR_OFFSET=0.0 -I/usr/local/include -Wno-return-type -fstack-protector-strong -fno-strict-aliasing -c -o xwin.o xwin.c ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" gmake[1]: *** [<builtin>: xwin.o] Error 1 gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/molden/work/molden5.8' *** Error code 1 Stop. make: stopped in /usr/ports/biology/molden
