You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     po...@freebsd.org
Last committer: b...@freebsd.org
Ident:          $FreeBSD: head/biology/avida/Makefile 327709 2013-09-20 
15:55:44Z bapt $
Log URL:        
http://beefy1.isc.freebsd.org/bulk/head-i386-default/2013-10-10_05h56m46s/logs/avida-2.12.4.log
Build URL:      
http://beefy1.isc.freebsd.org/bulk/head-i386-default/2013-10-10_05h56m46s
Log:

====>> Building biology/avida
build started at Thu Oct 10 21:45:28 UTC 2013
port directory: /usr/ports/biology/avida
building for: FreeBSD head-i386-default-job-01 10.0-ALPHA5 FreeBSD 10.0-ALPHA5 
r256139 i386
maintained by: po...@freebsd.org
Makefile ident:      $FreeBSD: head/biology/avida/Makefile 327709 2013-09-20 
15:55:44Z bapt $
Poudriere version: 3.1-pre

---Begin Environment---
UNAME_m=i386
UNAME_p=i386
OSVERSION=1000055
UNAME_v=FreeBSD 10.0-ALPHA5 r256139
UNAME_r=10.0-ALPHA5
BLOCKSIZE=K
MAIL=/var/mail/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
STATUS=1
MASTERMNT=/usr/local/poudriere/data/build/head-i386-default/ref
PKG_EXT=txz
tpid=96474
POUDRIERE_BUILD_TYPE=bulk
NBPARALLEL=24
PKGNG=1
PKGNAME=avida-2.12.4
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
PWD=/root
MASTERNAME=head-i386-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for avida-2.12.4:
     DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
TMPDIR="/tmp" TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
TMPDIR="/tmp" TMPDIR="/tmp" SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe 
-fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-Wl,-rpath=/usr/lib:/usr/local/lib"  CXX="c++" CXXFLAGS="-O2 -pipe 
-fno-strict-aliasing"  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-o root -g wheel -m 555"  BSD_INSTALL_LIB="install  -s -o root -g wheel -m 444" 
 BSD_INSTALL_SCRIPT="install  -o root -g wheel -m 555"  
BSD_INSTALL_DATA="install  -o root -g wheel -m 444"  BSD_INSTALL_MAN="install  
-o root -g wheel -m 444"
--End MAKE_ENV--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/avida
DOCSDIR=/usr/local/share/doc/avida
EXAMPLESDIR=/usr/local/share/examples/avida
WWWDIR=/usr/local/www/avida
ETCDIR=/usr/local/etc/avida
--End SUB_LIST--

---Begin make.conf---
ARCH=i386
MACHINE=i386
MACHINE_ARCH=i386
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=yes
---End make.conf---
===>  Cleaning for avida-2.12.4
=======================<phase: check-config   >============================
===========================================================================
=======================<phase: pkg-depends    >============================
===>   avida-2.12.4 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===>   Installing existing package /packages/All/pkg-1.1.4_7.txz
Installing pkg-1.1.4_7... done
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of avida-2.12.4
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by avida-2.12.4 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by avida-2.12.4 for building
=> SHA256 Checksum OK for avida-2.12.4-src.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by avida-2.12.4 for building
===>  Extracting for avida-2.12.4
=> SHA256 Checksum OK for avida-2.12.4-src.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for avida-2.12.4
===>  Applying FreeBSD patches for avida-2.12.4
===========================================================================
=======================<phase: build-depends  >============================
===>   avida-2.12.4 depends on file: /usr/local/bin/cmake - not found
===>    Verifying install for /usr/local/bin/cmake in /usr/ports/devel/cmake
===>   Installing existing package /packages/All/cmake-2.8.11.2.txz
Installing cmake-2.8.11.2...Installing cmake-modules-2.8.11.2_1... done
 done
===>   Returning to build of avida-2.12.4
===========================================================================
=======================<phase: lib-depends    >============================
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for avida-2.12.4
===>  Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/biology/avida/work/.build
-- The C compiler identification is Clang 3.3.0
-- The CXX compiler identification is Clang 3.3.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Performing Test HAVE_FUSED_MADD
-- Performing Test HAVE_FUSED_MADD - Success
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_CXX_FLAGS_DEBUG
    CMAKE_C_FLAGS_DEBUG
    CMAKE_C_FLAGS_RELEASE
    CMAKE_MODULE_LINKER_FLAGS
    THREADS_HAVE_PTHREAD_ARG


-- Build files have been written to: 
/wrkdirs/usr/ports/biology/avida/work/.build
===========================================================================
=======================<phase: build          >============================
===>  Building for avida-2.12.4
/usr/local/bin/cmake -H/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src 
-B/wrkdirs/usr/ports/biology/avida/work/.build --check-build-system 
CMakeFiles/Makefile.cmake 0
/usr/local/bin/cmake -E cmake_progress_start 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
/usr/bin/make -f libs/apto/src/CMakeFiles/aptoshared.dir/build.make 
libs/apto/src/CMakeFiles/aptoshared.dir/depend
cd /wrkdirs/usr/ports/biology/avida/work/.build && /usr/local/bin/cmake -E 
cmake_depends "Unix Makefiles" 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src 
/wrkdirs/usr/ports/biology/avida/work/.build 
/wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src 
/wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src/CMakeFiles/aptoshared.dir/DependInfo.cmake
Scanning dependencies of target aptoshared
/usr/bin/make -f libs/apto/src/CMakeFiles/aptoshared.dir/build.make 
libs/apto/src/CMakeFiles/aptoshared.dir/build
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 
[  0%] Building CXX object 
libs/apto/src/CMakeFiles/aptoshared.dir/core/FileSystem.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
-Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing  -mno-fused-madd 
-funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden 
-Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptoshared.dir/core/FileSystem.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/FileSystem.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 11
[  1%] Building CXX object 
libs/apto/src/CMakeFiles/aptoshared.dir/core/RefCount.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
-Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing  -mno-fused-madd 
-funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden 
-Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptoshared.dir/core/RefCount.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/RefCount.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 
[  1%] Building CXX object 
libs/apto/src/CMakeFiles/aptoshared.dir/core/Thread.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
-Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing  -mno-fused-madd 
-funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden 
-Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptoshared.dir/core/Thread.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/Thread.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 12
[  2%] Building CXX object 
libs/apto/src/CMakeFiles/aptoshared.dir/platform/Platform.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
-Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing  -mno-fused-madd 
-funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden 
-Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptoshared.dir/platform/Platform.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/platform/Platform.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 
[  2%] Building CXX object 
libs/apto/src/CMakeFiles/aptoshared.dir/stat/ContingencyTable.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
-Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing  -mno-fused-madd 
-funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden 
-Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptoshared.dir/stat/ContingencyTable.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/ContingencyTable.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 13
[  3%] Building CXX object 
libs/apto/src/CMakeFiles/aptoshared.dir/stat/FishersExact.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
-Daptoshared_EXPORTS -O2 -pipe -fno-strict-aliasing  -mno-fused-madd 
-funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden 
-Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG -fPIC 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptoshared.dir/stat/FishersExact.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/FishersExact.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/FishersExact.cc:1052:21:
 warning: unsequenced modification and access to 'idx_inc' [-Wunsequenced]
    while (row_diff[++idx_inc] == row_marginals[idx_inc]) ;
                    ^                           ~~~~~~~
1 warning generated.
Linking CXX shared library ../../../lib/libapto.so
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && 
/usr/local/bin/cmake -E cmake_link_script CMakeFiles/aptoshared.dir/link.txt 
--verbose=1
/usr/bin/c++  -fPIC -O2 -pipe -fno-strict-aliasing  -mno-fused-madd 
-funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden 
-Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG  
-Wl,-rpath=/usr/lib:/usr/local/lib -shared -Wl,-soname,libapto.so -o 
../../../lib/libapto.so CMakeFiles/aptoshared.dir/core/FileSystem.cc.o 
CMakeFiles/aptoshared.dir/core/RefCount.cc.o 
CMakeFiles/aptoshared.dir/core/Thread.cc.o 
CMakeFiles/aptoshared.dir/platform/Platform.cc.o 
CMakeFiles/aptoshared.dir/stat/ContingencyTable.cc.o 
CMakeFiles/aptoshared.dir/stat/FishersExact.cc.o -pthread -pthread 
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles  11 12 13
[  3%] Built target aptoshared
/usr/bin/make -f libs/apto/src/CMakeFiles/aptostatic.dir/build.make 
libs/apto/src/CMakeFiles/aptostatic.dir/depend
cd /wrkdirs/usr/ports/biology/avida/work/.build && /usr/local/bin/cmake -E 
cmake_depends "Unix Makefiles" 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src 
/wrkdirs/usr/ports/biology/avida/work/.build 
/wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src 
/wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src/CMakeFiles/aptostatic.dir/DependInfo.cmake
Scanning dependencies of target aptostatic
/usr/bin/make -f libs/apto/src/CMakeFiles/aptostatic.dir/build.make 
libs/apto/src/CMakeFiles/aptostatic.dir/build
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 
[  3%] Building CXX object 
libs/apto/src/CMakeFiles/aptostatic.dir/core/FileSystem.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
 -O2 -pipe -fno-strict-aliasing  -mno-fused-madd -funroll-loops 
-fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra 
-Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptostatic.dir/core/FileSystem.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/FileSystem.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 14
[  4%] Building CXX object 
libs/apto/src/CMakeFiles/aptostatic.dir/core/RefCount.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
 -O2 -pipe -fno-strict-aliasing  -mno-fused-madd -funroll-loops 
-fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra 
-Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptostatic.dir/core/RefCount.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/RefCount.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 
[  4%] Building CXX object 
libs/apto/src/CMakeFiles/aptostatic.dir/core/Thread.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
 -O2 -pipe -fno-strict-aliasing  -mno-fused-madd -funroll-loops 
-fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra 
-Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptostatic.dir/core/Thread.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/core/Thread.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 15
[  5%] Building CXX object 
libs/apto/src/CMakeFiles/aptostatic.dir/platform/Platform.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
 -O2 -pipe -fno-strict-aliasing  -mno-fused-madd -funroll-loops 
-fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra 
-Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptostatic.dir/platform/Platform.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/platform/Platform.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 
[  5%] Building CXX object 
libs/apto/src/CMakeFiles/aptostatic.dir/stat/ContingencyTable.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
 -O2 -pipe -fno-strict-aliasing  -mno-fused-madd -funroll-loops 
-fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra 
-Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptostatic.dir/stat/ContingencyTable.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/ContingencyTable.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 16
[  6%] Building CXX object 
libs/apto/src/CMakeFiles/aptostatic.dir/stat/FishersExact.cc.o
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && /usr/bin/c++   
 -O2 -pipe -fno-strict-aliasing  -mno-fused-madd -funroll-loops 
-fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden -Wextra 
-Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/../include
 -o CMakeFiles/aptostatic.dir/stat/FishersExact.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/FishersExact.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/src/stat/FishersExact.cc:1052:21:
 warning: unsequenced modification and access to 'idx_inc' [-Wunsequenced]
    while (row_diff[++idx_inc] == row_marginals[idx_inc]) ;
                    ^                           ~~~~~~~
1 warning generated.
Linking CXX static library ../../../lib/libapto.a
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && 
/usr/local/bin/cmake -P CMakeFiles/aptostatic.dir/cmake_clean_target.cmake
cd /wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/src && 
/usr/local/bin/cmake -E cmake_link_script CMakeFiles/aptostatic.dir/link.txt 
--verbose=1
/usr/bin/ar cr ../../../lib/libapto.a  
CMakeFiles/aptostatic.dir/core/FileSystem.cc.o 
CMakeFiles/aptostatic.dir/core/RefCount.cc.o 
CMakeFiles/aptostatic.dir/core/Thread.cc.o 
CMakeFiles/aptostatic.dir/platform/Platform.cc.o 
CMakeFiles/aptostatic.dir/stat/ContingencyTable.cc.o 
CMakeFiles/aptostatic.dir/stat/FishersExact.cc.o
/usr/bin/ranlib ../../../lib/libapto.a
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles  14 15 16
[  6%] Built target aptostatic
/usr/bin/make -f 
libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/build.make 
libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/depend
cd /wrkdirs/usr/ports/biology/avida/work/.build && /usr/local/bin/cmake -E 
cmake_depends "Unix Makefiles" 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest
 /wrkdirs/usr/ports/biology/avida/work/.build 
/wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/utils/unittest/googletest
 
/wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake
Scanning dependencies of target gtest
/usr/bin/make -f 
libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/build.make 
libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/build
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/biology/avida/work/.build/CMakeFiles 91
[  7%] Building CXX object 
libs/apto/utils/unittest/googletest/CMakeFiles/gtest.dir/gtest-death-test.cc.o
cd 
/wrkdirs/usr/ports/biology/avida/work/.build/libs/apto/utils/unittest/googletest
 && /usr/bin/c++    -O2 -pipe -fno-strict-aliasing  -mno-fused-madd 
-funroll-loops -fstrict-aliasing -ftree-vectorize -fvisibility-inlines-hidden 
-Wextra -Wno-unknown-pragmas -Wno-trigraphs -DNDEBUG 
-I/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include
 -o CMakeFiles/gtest.dir/gtest-death-test.cc.o -c 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/gtest-death-test.cc
c++: warning: argument unused during compilation: '-mno-fused-madd'
In file included from 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/gtest-death-test.cc:66:
In file included from 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-internal-inl.h:65:
In file included from 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/gtest.h:61:
In file included from 
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/gtest-param-test.h:163:
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2837:46:
 error: no member named 'tr1' in namespace 'std'
    : public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2> > {
                                      ~~~~~~~^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2837:57:
 error: 'T1' does not refer to a value
    : public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2> > {
                                                        ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2835:20:
 note: declared here
template <typename T1, typename T2>
                   ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2837:65:
 error: expected class name
    : public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2> > {
                                                                ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2839:18:
 error: no member named 'tr1' in namespace 'std'
  typedef ::std::tr1::tuple<T1, T2> ParamType;
          ~~~~~~~^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2839:28:
 error: expected member name or ';' after declaration specifiers
  typedef ::std::tr1::tuple<T1, T2> ParamType;
  ~~~~~~~~~~~~~~~~~~~~~~~~~^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2846:34:
 error: use of undeclared identifier 'ParamType'
  virtual ParamIteratorInterface<ParamType>* Begin() const {
                                 ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2849:34:
 error: use of undeclared identifier 'ParamType'
  virtual ParamIteratorInterface<ParamType>* End() const {
                                 ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2854:50:
 error: use of undeclared identifier 'ParamType'
  class Iterator : public ParamIteratorInterface<ParamType> {
                                                 ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2854:61:
 error: expected class name
  class Iterator : public ParamIteratorInterface<ParamType> {
                                                            ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2856:44:
 error: use of undeclared identifier 'ParamType'
    Iterator(const ParamGeneratorInterface<ParamType>* base,
                                           ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2868:43:
 error: use of undeclared identifier 'ParamType'
    virtual const ParamGeneratorInterface<ParamType>* BaseGenerator() const {
                                          ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2882:36:
 error: use of undeclared identifier 'ParamType'
    virtual ParamIteratorInterface<ParamType>* Clone() const {
                                   ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2885:19:
 error: unknown type name 'ParamType'
    virtual const ParamType* Current() const { return &current_value_; }
                  ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2886:54:
 error: use of undeclared identifier 'ParamType'
    virtual bool Equals(const ParamIteratorInterface<ParamType>& other) const {
                                                     ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2930:35:
 error: use of undeclared identifier 'ParamType'
    const ParamGeneratorInterface<ParamType>* const base_;
                                  ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2939:5:
 error: unknown type name 'ParamType'
    ParamType current_value_;
    ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2952:46:
 error: no member named 'tr1' in namespace 'std'
    : public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2, T3> > {
                                      ~~~~~~~^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2952:57:
 error: 'T1' does not refer to a value
    : public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2, T3> > {
                                                        ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2950:20:
 note: declared here
template <typename T1, typename T2, typename T3>
                   ^
/wrkdirs/usr/ports/biology/avida/work/avida-2.12.4-src/libs/apto/utils/unittest/googletest/include/gtest/internal/gtest-param-util-generated.h:2952:69:
 error: expected class name
    : public ParamGeneratorInterface< ::std::tr1::tuple<T1, T2, T3> > {
                                                                    ^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
20 errors generated.
*** Error code 1

Stop.
make[3]: stopped in /wrkdirs/usr/ports/biology/avida/work/.build
*** Error code 1

Stop.
make[2]: stopped in /wrkdirs/usr/ports/biology/avida/work/.build
*** Error code 1

Stop.
make[1]: stopped in /wrkdirs/usr/ports/biology/avida/work/.build
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/avida
===>  Cleaning for avida-2.12.4
_______________________________________________
freebsd-pkg-fallout@freebsd.org mailing list
https://lists.freebsd.org/mailman/listinfo/freebsd-pkg-fallout
To unsubscribe, send any mail to "freebsd-pkg-fallout-unsubscr...@freebsd.org"

Reply via email to