You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     jwba...@tds.net
Last committer: b...@freebsd.org
Ident:          $FreeBSD: head/science/minc2/Makefile 330275 2013-10-14 
06:52:32Z bapt $
Log URL:        
http://beefy1.isc.freebsd.org/bulk/91i386-default/2013-10-16_14h14m28s/logs/minc2-2.2.00_1.log
Build URL:      
http://beefy1.isc.freebsd.org/bulk/91i386-default/2013-10-16_14h14m28s
Log:

====>> Building science/minc2
build started at Wed Oct 16 23:13:33 UTC 2013
port directory: /usr/ports/science/minc2
building for: FreeBSD 91i386-default-job-13 9.1-RELEASE FreeBSD 9.1-RELEASE i386
maintained by: jwba...@tds.net
Makefile ident:      $FreeBSD: head/science/minc2/Makefile 330275 2013-10-14 
06:52:32Z bapt $
Poudriere version: 3.1-pre

---Begin Environment---
UNAME_m=i386
UNAME_p=i386
OSVERSION=901000
UNAME_v=FreeBSD 9.1-RELEASE
UNAME_r=9.1-RELEASE
BLOCKSIZE=K
MAIL=/var/mail/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
STATUS=1
MASTERMNT=/usr/local/poudriere/data/build/91i386-default/ref
PKG_EXT=txz
tpid=62508
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=minc2-2.2.00_1
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
PWD=/root
MASTERNAME=91i386-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
TMPDIR="/tmp" SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local  LOCALBASE=/usr/local 
 LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing"  CPP="cpp" 
CPPFLAGS=" -I/usr/local/include -DH5_USE_16_API"  LDFLAGS=" -L/usr/local/lib 
-pthread"  CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing"  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -o root -g wheel -m 
555"  BSD_INSTALL_LIB="install  -s -o root -g wheel -m 444"  
BSD_INSTALL_SCRIPT="install  -o root -g wheel -m 555"  
BSD_INSTALL_DATA="install  -o root -g wheel -m 444"  BSD_INSTALL_MAN="install  
-o root -g wheel -m 444"
--End MAKE_ENV--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/minc
DOCSDIR=/usr/local/share/doc/minc
EXAMPLESDIR=/usr/local/share/examples/minc
WWWDIR=/usr/local/www/minc
ETCDIR=/usr/local/etc/minc
--End SUB_LIST--

---Begin make.conf---
ARCH=i386
MACHINE=i386
MACHINE_ARCH=i386
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
===>  Cleaning for minc2-2.2.00_1
=======================<phase: check-config   >============================
===========================================================================
=======================<phase: pkg-depends    >============================
===>   minc2-2.2.00_1 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===>   Installing existing package /packages/All/pkg-1.1.4_8.txz
Installing pkg-1.1.4_8... done
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of minc2-2.2.00_1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD accepted by the user
===> Fetching all distfiles required by minc2-2.2.00_1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD accepted by the user
===> Fetching all distfiles required by minc2-2.2.00_1 for building
=> SHA256 Checksum OK for minc-2.2.00.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD accepted by the user
===> Fetching all distfiles required by minc2-2.2.00_1 for building
===>  Extracting for minc2-2.2.00_1
=> SHA256 Checksum OK for minc-2.2.00.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for minc2-2.2.00_1
===========================================================================
=======================<phase: build-depends  >============================
===>   minc2-2.2.00_1 depends on file: /usr/local/bin/cmake - not found
===>    Verifying install for /usr/local/bin/cmake in /usr/ports/devel/cmake
===>   Installing existing package /packages/All/cmake-2.8.11.2.txz
Installing cmake-2.8.11.2...Installing cmake-modules-2.8.11.2_1... done
 done
===>   Returning to build of minc2-2.2.00_1
===>   minc2-2.2.00_1 depends on executable: bison - not found
===>    Verifying install for bison in /usr/ports/devel/bison
===>   Installing existing package /packages/All/bison-2.7.1,1.txz
Installing bison-2.7.1,1...Installing m4-1.4.17,1... done
Installing gettext-0.18.3.1...Installing libiconv-1.14_1... done
 done
 done
===>   Returning to build of minc2-2.2.00_1
===========================================================================
=======================<phase: lib-depends    >============================
===>   minc2-2.2.00_1 depends on shared library: netcdf.4 - not found
===>    Verifying install for netcdf.4 in /usr/ports/science/netcdf
===>   Installing existing package /packages/All/netcdf-3.6.3_4.txz
Installing netcdf-3.6.3_4... done
===>   Returning to build of minc2-2.2.00_1
===>   minc2-2.2.00_1 depends on shared library: hdf5 - not found
===>    Verifying install for hdf5 in /usr/ports/science/hdf5
===>   Installing existing package /packages/All/hdf5-1.6.9_2.txz
Installing hdf5-1.6.9_2... done
===>   Returning to build of minc2-2.2.00_1
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for minc2-2.2.00_1
===>  Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/science/minc2/work/.build
-- The C compiler identification is GNU 4.2.1
-- The CXX compiler identification is GNU 4.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Found NetCDF headers: /usr/local/include
-- Found NetCDF library: /usr/local/lib/libnetcdf.so
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.7") 
-- Found components for HDF5
-- HDF5 library : /usr/local/lib/libhdf5.so
-- HDF5 headers : /usr/local/include
-- Looking for mkstemp
-- Looking for mkstemp - found
-- Looking for tmpnam
-- Looking for tmpnam - found
-- Looking for tempnam
-- Looking for tempnam - found
-- Looking for strerror
-- Looking for strerror - found
-- Looking for popen
-- Looking for popen - found
-- Looking for fork
-- Looking for fork - found
-- Looking for vfork
-- Looking for vfork - found
-- Looking for fdopen
-- Looking for fdopen - found
-- Looking for strdup
-- Looking for strdup - found
-- Looking for getpwnam
-- Looking for getpwnam - found
-- Looking for select
-- Looking for select - found
-- Looking for sysconf
-- Looking for sysconf - found
-- Looking for system
-- Looking for system - found
-- Looking for include file float.h
-- Looking for include file float.h - found
-- Looking for include file sys/dir.h
-- Looking for include file sys/dir.h - found
-- Looking for include file sys/ndir.h
-- Looking for include file sys/ndir.h - not found
-- Looking for include file sys/stat.h
-- Looking for include file sys/stat.h - found
-- Looking for include file sys/types.h
-- Looking for include file sys/types.h - found
-- Looking for include file sys/wait.h
-- Looking for include file sys/wait.h - found
-- Looking for include file values.h
-- Looking for include file values.h - not found
-- Looking for include file unistd.h
-- Looking for include file unistd.h - found
-- Looking for include file dirent.h
-- Looking for include file dirent.h - found
-- Looking for include file memory.h
-- Looking for include file memory.h - found
-- Looking for include file stdlib.h
-- Looking for include file stdlib.h - found
-- Looking for include file fcntl.h
-- Looking for include file fcntl.h - found
-- Looking for include file dlfcn.h
-- Looking for include file dlfcn.h - found
-- Looking for include file vfork.h
-- Looking for include file vfork.h - not found
-- Looking for include file inttypes.h
-- Looking for include file inttypes.h - found
-- Looking for include file string.h
-- Looking for include file string.h - found
-- Looking for include file strings.h
-- Looking for include file strings.h - found
-- Looking for include file pwd.h
-- Looking for include file pwd.h - found
-- Found BISON: /usr/local/bin/bison (found version "2.7.12-4996") 
-- Found FLEX: /usr/bin/flex (found version "2.5.4") 
CMake Warning (dev) at CMakeLists.txt:334 (ADD_SUBDIRECTORY):
  The source directory

    /wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/ezminc

  does not contain a CMakeLists.txt file.

  CMake does not support this case but it used to work accidentally and is
  being allowed for compatibility.

  Policy CMP0014 is not set: Input directories must have CMakeLists.txt.  Run
  "cmake --help-policy CMP0014" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning (dev) at CMakeLists.txt:409 (ADD_SUBDIRECTORY):
  The source directory

    /wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/testdir

  does not contain a CMakeLists.txt file.

  CMake does not support this case but it used to work accidentally and is
  being allowed for compatibility.

  Policy CMP0014 is not set: Input directories must have CMakeLists.txt.  Run
  "cmake --help-policy CMP0014" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_CXX_FLAGS_DEBUG
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_DEBUG
    CMAKE_MODULE_LINKER_FLAGS
    THREADS_HAVE_PTHREAD_ARG


-- Build files have been written to: 
/wrkdirs/usr/ports/science/minc2/work/.build
===========================================================================
=======================<phase: build          >============================
===>  Building for minc2-2.2.00_1
/usr/local/bin/cmake -H/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00 
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-fPIC -O2 -pipe -fno-strict-aliasing -fPIC 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/ezminc 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00 
-I/wrkdirs/usr/ports/science/minc2/work/.build 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/volume_io/Include 
-I/usr/local/include 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc2 -o 
CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o   -c 
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/voxel_loop.c
/usr/local/bin/cmake -E cmake_progress_report 
/wrkdirs/usr/ports/science/minc2/work/.build/CMakeFiles 21
[  8%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o
/usr/bin/cc  -DHAVE_CONFIG_H -Dminc2_EXPORTS -O2 -pipe -fno-strict-aliasing   
-fPIC -O2 -pipe -fno-strict-aliasing -fPIC 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/ezminc 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00 
-I/wrkdirs/usr/ports/science/minc2/work/.build 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/volume_io/Include 
-I/usr/local/include 
-I/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc2 -o 
CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o   -c 
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/hdf_convenience.c
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/hdf_convenience.c: In 
function 'hdf_put_dimorder':
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/hdf_convenience.c:621: 
error: too many arguments to function 'H5Acreate'
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/hdf_convenience.c: In 
function 'hdf_set_length':
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/hdf_convenience.c:928: 
error: too many arguments to function 'H5Acreate'
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/hdf_convenience.c: In 
function 'hdf_attput':
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/hdf_convenience.c:1189:
 error: too many arguments to function 'H5Acreate'
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/hdf_convenience.c: In 
function 'hdf_copy_attr':
/wrkdirs/usr/ports/science/minc2/work/minc-2.2.00/libsrc/hdf_convenience.c:2071:
 error: too many arguments to function 'H5Acreate'
*** [CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o] Error code 1

Stop in /wrkdirs/usr/ports/science/minc2/work/.build.
*** [CMakeFiles/minc2.dir/all] Error code 1

Stop in /wrkdirs/usr/ports/science/minc2/work/.build.
*** [all] Error code 1

Stop in /wrkdirs/usr/ports/science/minc2/work/.build.
*** [do-build] Error code 1

Stop in /usr/ports/science/minc2.
===>  Cleaning for minc2-2.2.00_1
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