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Maintainer: [email protected] Log URL: https://pkg-status.freebsd.org/beefy16/data/135amd64-default/964e59282a49/logs/spheral-2024.06.1_5.log Build URL: https://pkg-status.freebsd.org/beefy16/build.html?mastername=135amd64-default&build=964e59282a49 Log: =>> Building science/spheral build started at Tue Sep 23 01:06:49 -00 2025 port directory: /usr/ports/science/spheral package name: spheral-2024.06.1_5 building for: FreeBSD 135amd64-default-job-03 13.5-RELEASE-p3 FreeBSD 13.5-RELEASE-p3 amd64 maintained by: [email protected] Makefile datestamp: -rw-r--r-- 1 root wheel 2361 Jun 7 01:02 /usr/ports/science/spheral/Makefile Ports top last git commit: 964e59282a4 Ports top unclean checkout: no Port dir last git commit: 18632db919c Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.3 Host OSVERSION: 1600000 Jail OSVERSION: 1305000 Job Id: 03 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1305000 UNAME_v=FreeBSD 13.5-RELEASE-p3 UNAME_r=13.5-RELEASE-p3 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.3 MASTERMNT=/usr/local/poudriere/data/.m/135amd64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/135amd64-default/03/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=135amd64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/135amd64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.3 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/spheral/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/spheral/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/spheral/work/.cache HOME=/wrkdirs/usr/ports/science/spheral/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/spheral/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/spheral/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" LUA_MODLIBDIR=/usr/local/lib/lua/5.4 LUA_MODSHAREDIR=/usr/local/share/lua/5.4 LUA_MODDOCSDIR=/usr/local/share/doc/lua54 LUA_INCDIR=/usr/local/include/lua54 LUA_LIBDIR=/usr/local/lib LUA_VER=5.4 LUA_VER_STR=54 XDG_DATA_HOME=/wrkdirs/usr/ports/science/spheral/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/spheral/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/spheral/work/.cache HOME=/wrkdirs/usr/ports/science/spheral/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/spheral/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/spheral/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/b in/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include/eigen3 -isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="instal l -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" LUA_MODLIBDIR=lib/lua/5.4 LUA_MODSHAREDIR=share/lua/5.4 LUA_MODDOCSDIR=share/doc/lua54 LUA_INCDIR=include/lua54 LUA_VER=5.4 LUA_VER_STR=54 PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=13.5 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/spheral" EXAMPLESDIR="share/examples/spheral" DATADIR="share/spheral" WWWDIR="www/spheral" ETCDIR="etc/spheral" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/spheral DOCSDIR=/usr/local/share/doc/spheral EXAMPLESDIR=/usr/local/share/examples/spheral WWWDIR=/usr/local/www/spheral ETCDIR=/usr/local/etc/spheral --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> spheral-2024.06.1_5 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.3.1.pkg [135amd64-default-job-03] Installing pkg-2.3.1... [135amd64-default-job-03] Extracting pkg-2.3.1: .......... done ===> spheral-2024.06.1_5 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of spheral-2024.06.1_5 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by spheral-2024.06.1_5 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by spheral-2024.06.1_5 for building => SHA256 Checksum OK for LLNL-spheral-v2024.06.1_GH0.tar.gz. => SHA256 Checksum OK for LLNL-PolyClipper-e1fe47c_GH0.tar.gz. => SHA256 Checksum OK for LLNL-PYB11Generator-7160812_GH0.tar.gz. => SHA256 Checksum OK for llnl-blt-29eecef_GH0.tar.gz. => SHA256 Checksum OK for llnl-uberenv-126f8de_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by spheral-2024.06.1_5 for building ===> Extracting for spheral-2024.06.1_5 => SHA256 Checksum OK for LLNL-spheral-v2024.06.1_GH0.tar.gz. => SHA256 Checksum OK for LLNL-PolyClipper-e1fe47c_GH0.tar.gz. => SHA256 Checksum OK for LLNL-PYB11Generator-7160812_GH0.tar.gz. => SHA256 Checksum OK for llnl-blt-29eecef_GH0.tar.gz. => SHA256 Checksum OK for llnl-uberenv-126f8de_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for spheral-2024.06.1_5 ===> Applying FreeBSD patches for spheral-2024.06.1_5 from /usr/ports/science/spheral/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> spheral-2024.06.1_5 depends on file: /usr/local/include/polyclipper2d.hh - not found ===> Installing existing package /packages/All/polyclipper-1.2.4.pkg [135amd64-default-job-03] Installing polyclipper-1.2.4... [135amd64-default-job-03] Extracting polyclipper-1.2.4: .......... done ===> spheral-2024.06.1_5 depends on file: /usr/local/include/polyclipper2d.hh - found ===> Returning to build of spheral-2024.06.1_5 ===> spheral-2024.06.1_5 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-core-3.31.7_1.pkg [135amd64-default-job-03] Installing cmake-core-3.31.7_1... [135amd64-default-job-03] `-- Installing expat-2.7.1... [135amd64-default-job-03] `-- Extracting expat-2.7.1: .......... done [135amd64-default-job-03] `-- Installing jsoncpp-1.9.6_1... [135amd64-default-job-03] `-- Extracting jsoncpp-1.9.6_1: .......... done [135amd64-default-job-03] `-- Installing libidn2-2.3.8... [135amd64-default-job-03] | `-- Installing indexinfo-0.3.1_1... [135amd64-default-job-03] | `-- Extracting indexinfo-0.3.1_1: .... done [135amd64-default-job-03] | `-- Installing libunistring-1.3... [135amd64-default-job-03] | `-- Extracting libunistring-1.3: .......... done <snip> /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Utilities/globalNodeIDsInline.hh:105:7: warning: variable 'numGlobalNodes' set but not used [-Wunused-but-set-variable] 105 | int numGlobalNodes = numLocalNodes; | ^ --- src/Kernel/CMakeFiles/Spheral_Kernel.dir/all --- --- src/Kernel/CMakeFiles/Spheral_Kernel.dir/WendlandC2KernelInst2d.cc.o --- [ 60%] Building CXX object src/Kernel/CMakeFiles/Spheral_Kernel.dir/WendlandC2KernelInst2d.cc.o cd /wrkdirs/usr/ports/science/spheral/work/.build/src/Kernel && /usr/bin/c++ -DCXXONLY=1 -DDEBUG=0 -DENABLE_OPENSUBDIV -DNOPOLYTOPE=1 -DNOR3D=1 -DSPHERAL1D=1 -DSPHERAL2D=1 -DSPHERAL3D=1 -DUSE_MPI=1 -DUSE_TETGEN=0 -DUSE_TRIANGLE=0 -I/wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/. -I/wrkdirs/usr/ports/science/spheral/work/.build/src -I/wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/Kernel/. -I/usr/local/include/conduit -isystem /usr/local/include/json-c -isystem /usr/local/include/gcc13 -isystem /usr/local/include/lua54 -Wall -Wextra -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include/eigen3 -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include/eigen3 -isystem /usr/local/include -DNDEBUG -std=c++17 -fPIC -Wno-unused-command-line-argument -Wno-c++17-extensions -Wno-unused-parameter -fopenmp=libomp -MD -MT src/Kerne l/CMakeFiles/Spheral_Kernel.dir/WendlandC2KernelInst2d.cc.o -MF CMakeFiles/Spheral_Kernel.dir/WendlandC2KernelInst2d.cc.o.d -o CMakeFiles/Spheral_Kernel.dir/WendlandC2KernelInst2d.cc.o -c /wrkdirs/usr/ports/science/spheral/work/.build/src/Kernel/WendlandC2KernelInst2d.cc --- src/Material/CMakeFiles/Spheral_Material.dir/all --- In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:35:16: warning: 'setPressure' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 35 | virtual void setPressure(Field<Dimension, Scalar>& Pressure, | ^ /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:9:18: note: in instantiation of template class 'Spheral::PolytropicEquationOfState<Spheral::Dim<2>>' requested here 9 | template class PolytropicEquationOfState< Dim< 2 > >; | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:44:16: note: overridden virtual function is here 44 | virtual void setPressure(Field<Dimension, Scalar>& Pressure, | ^ In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:45:16: warning: 'setTemperature' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 45 | virtual void setTemperature(Field<Dimension, Scalar>& temperature, | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:54:16: note: overridden virtual function is here 54 | virtual void setTemperature(Field<Dimension, Scalar>& temperature, | ^ In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:49:16: warning: 'setSpecificThermalEnergy' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 49 | virtual void setSpecificThermalEnergy(Field<Dimension, Scalar>& specificThermalEnergy, | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:58:16: note: overridden virtual function is here 58 | virtual void setSpecificThermalEnergy(Field<Dimension, Scalar>& specificThermalEnergy, | ^ In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:53:16: warning: 'setSpecificHeat' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 53 | virtual void setSpecificHeat(Field<Dimension, Scalar>& specificHeat, | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:62:16: note: overridden virtual function is here 62 | virtual void setSpecificHeat(Field<Dimension, Scalar>& specificHeat, | ^ In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:57:16: warning: 'setSoundSpeed' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 57 | virtual void setSoundSpeed(Field<Dimension, Scalar>& soundSpeed, | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:66:16: note: overridden virtual function is here 66 | virtual void setSoundSpeed(Field<Dimension, Scalar>& soundSpeed, | ^ In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:61:16: warning: 'setGammaField' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 61 | virtual void setGammaField(Field<Dimension, Scalar>& gamma, | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:70:16: note: overridden virtual function is here 70 | virtual void setGammaField(Field<Dimension, Scalar>& gamma, | ^ In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:65:16: warning: 'setBulkModulus' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 65 | virtual void setBulkModulus(Field<Dimension, Scalar>& bulkModulus, | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:74:16: note: overridden virtual function is here 74 | virtual void setBulkModulus(Field<Dimension, Scalar>& bulkModulus, | ^ In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:69:16: warning: 'setEntropy' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 69 | virtual void setEntropy(Field<Dimension, Scalar>& entropy, | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:78:16: note: overridden virtual function is here 78 | virtual void setEntropy(Field<Dimension, Scalar>& entropy, | ^ In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:102:18: warning: 'molecularWeight' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 102 | virtual Scalar molecularWeight() const; | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:93:18: note: overridden virtual function is here 93 | virtual Scalar molecularWeight() const; | ^ In file included from /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst2d.cc:5: In file included from /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.cc:7: /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/PolytropicEquationOfState.hh:104:16: warning: 'valid' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] 104 | virtual bool valid() const; | ^ /wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/./Material/EquationOfState.hh:113:16: note: overridden virtual function is here 113 | virtual bool valid() const = 0; | ^ 10 warnings generated. --- src/Material/CMakeFiles/Spheral_Material.dir/PolytropicEquationOfStateInst3d.cc.o --- [ 60%] Building CXX object src/Material/CMakeFiles/Spheral_Material.dir/PolytropicEquationOfStateInst3d.cc.o cd /wrkdirs/usr/ports/science/spheral/work/.build/src/Material && /usr/bin/c++ -DCXXONLY=1 -DDEBUG=0 -DENABLE_OPENSUBDIV -DNOPOLYTOPE=1 -DNOR3D=1 -DSPHERAL1D=1 -DSPHERAL2D=1 -DSPHERAL3D=1 -DUSE_MPI=1 -DUSE_TETGEN=0 -DUSE_TRIANGLE=0 -I/wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/. -I/wrkdirs/usr/ports/science/spheral/work/.build/src -I/wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/Material/. -I/wrkdirs/usr/ports/science/spheral/work/.build/lib/fortran -I/usr/local/include/conduit -isystem /usr/local/include/json-c -isystem /usr/local/include/gcc13 -isystem /usr/local/include/lua54 -Wall -Wextra -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include/eigen3 -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include/eigen3 -isystem /usr/local/include -DNDEBUG -std=c++17 -fPIC -Wno-unused-command-line-argument -Wno-c++17-e xtensions -Wno-unused-parameter -fopenmp=libomp -MD -MT src/Material/CMakeFiles/Spheral_Material.dir/PolytropicEquationOfStateInst3d.cc.o -MF CMakeFiles/Spheral_Material.dir/PolytropicEquationOfStateInst3d.cc.o.d -o CMakeFiles/Spheral_Material.dir/PolytropicEquationOfStateInst3d.cc.o -c /wrkdirs/usr/ports/science/spheral/work/.build/src/Material/PolytropicEquationOfStateInst3d.cc --- src/KernelIntegrator/CMakeFiles/Spheral_KernelIntegrator.dir/all --- 1 warning generated. --- src/KernelIntegrator/CMakeFiles/Spheral_KernelIntegrator.dir/FlatConnectivityInst3d.cc.o --- [ 60%] Building CXX object src/KernelIntegrator/CMakeFiles/Spheral_KernelIntegrator.dir/FlatConnectivityInst3d.cc.o cd /wrkdirs/usr/ports/science/spheral/work/.build/src/KernelIntegrator && /usr/bin/c++ -DCXXONLY=1 -DDEBUG=0 -DENABLE_OPENSUBDIV -DNOPOLYTOPE=1 -DNOR3D=1 -DSPHERAL1D=1 -DSPHERAL2D=1 -DSPHERAL3D=1 -DUSE_MPI=1 -DUSE_TETGEN=0 -DUSE_TRIANGLE=0 -I/wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/. -I/wrkdirs/usr/ports/science/spheral/work/.build/src -I/wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/KernelIntegrator/. -I/usr/local/include/conduit -isystem /usr/local/include/json-c -isystem /usr/local/include/gcc13 -isystem /usr/local/include/lua54 -Wall -Wextra -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include/eigen3 -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include/eigen3 -isystem /usr/local/include -DNDEBUG -std=c++17 -fPIC -Wno-unused-command-line-argument -Wno-c++17-extensions -Wno-unused-parameter -fopenmp=libo mp -MD -MT src/KernelIntegrator/CMakeFiles/Spheral_KernelIntegrator.dir/FlatConnectivityInst3d.cc.o -MF CMakeFiles/Spheral_KernelIntegrator.dir/FlatConnectivityInst3d.cc.o.d -o CMakeFiles/Spheral_KernelIntegrator.dir/FlatConnectivityInst3d.cc.o -c /wrkdirs/usr/ports/science/spheral/work/.build/src/KernelIntegrator/FlatConnectivityInst3d.cc --- src/Kernel/CMakeFiles/Spheral_Kernel.dir/all --- PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script. Stack dump: 0. Program arguments: /usr/bin/c++ -DCXXONLY=1 -DDEBUG=0 -DENABLE_OPENSUBDIV -DNOPOLYTOPE=1 -DNOR3D=1 -DSPHERAL1D=1 -DSPHERAL2D=1 -DSPHERAL3D=1 -DUSE_MPI=1 -DUSE_TETGEN=0 -DUSE_TRIANGLE=0 -I/wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/. -I/wrkdirs/usr/ports/science/spheral/work/.build/src -I/wrkdirs/usr/ports/science/spheral/work/spheral-2024.06.1/src/Kernel/. -I/usr/local/include/conduit -isystem /usr/local/include/json-c -isystem /usr/local/include/gcc13 -isystem /usr/local/include/lua54 -Wall -Wextra -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include/eigen3 -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -I/usr/local/include/eigen3 -isystem /usr/local/include -DNDEBUG -std=c++17 -fPIC -Wno-unused-command-line-argument -Wno-c++17-extensions -Wno-unused-parameter -fopenmp=libomp -MD -MT src/Kernel/CMakeFiles/Spheral_Kernel.dir/WendlandC2Kern elInst2d.cc.o -MF CMakeFiles/Spheral_Kernel.dir/WendlandC2KernelInst2d.cc.o.d -o CMakeFiles/Spheral_Kernel.dir/WendlandC2KernelInst2d.cc.o -c /wrkdirs/usr/ports/science/spheral/work/.build/src/Kernel/WendlandC2KernelInst2d.cc 1. <eof> parser at end of file 2. /usr/local/include/axom/core/Array.hpp:1564:35: instantiating function definition 'axom::Array<int, 2>::swap' 3. /usr/local/include/axom/core/ArrayBase.hpp:349:8: instantiating function definition 'axom::ArrayBase<int, 2, axom::Array<int, 2>>::swap' 4. /usr/include/c++/v1/__utility/swap.h:40:81: instantiating function definition 'std::swap<axom::StackArray<int, 2>>' #0 0x00000000055395b1 (/usr/bin/c+++0x55395b1) #1 0x0000000005537565 (/usr/bin/c+++0x5537565) #2 0x0000000005503628 (/usr/bin/c+++0x5503628) #3 0x000000082b664310 (/lib/libthr.so.3+0x1a310) #4 0x000000082b6638db (/lib/libthr.so.3+0x198db) #5 0x00000008287cd2d3 ([vdso]+0x2d3) #6 0x00000000025daf20 (/usr/bin/c+++0x25daf20) #7 0x00000000025b7424 (/usr/bin/c+++0x25b7424) #8 0x00000000025b7626 (/usr/bin/c+++0x25b7626) #9 0x0000000003d3e2d2 (/usr/bin/c+++0x3d3e2d2) #10 0x0000000003d3e4ee (/usr/bin/c+++0x3d3e4ee) #11 0x0000000003d069c9 (/usr/bin/c+++0x3d069c9) #12 0x0000000003d0641e (/usr/bin/c+++0x3d0641e) #13 0x0000000003d06305 (/usr/bin/c+++0x3d06305) #14 0x0000000003d09c66 (/usr/bin/c+++0x3d09c66) #15 0x00000000042612d3 (/usr/bin/c+++0x42612d3) #16 0x000000000422a3e3 (/usr/bin/c+++0x422a3e3) #17 0x0000000004253d85 (/usr/bin/c+++0x4253d85) #18 0x0000000004257c5c (/usr/bin/c+++0x4257c5c) #19 0x000000000422841d (/usr/bin/c+++0x422841d) #20 0x00000000042598e4 (/usr/bin/c+++0x42598e4) #21 0x00000000042283ad (/usr/bin/c+++0x42283ad) #22 0x000000000428f627 (/usr/bin/c+++0x428f627) #23 0x0000000004291e76 (/usr/bin/c+++0x4291e76) #24 0x000000000428f75a (/usr/bin/c+++0x428f75a) #25 0x0000000004291e76 (/usr/bin/c+++0x4291e76) #26 0x000000000428f75a (/usr/bin/c+++0x428f75a) #27 0x0000000004291e76 (/usr/bin/c+++0x4291e76) #28 0x00000000038b7503 (/usr/bin/c+++0x38b7503) #29 0x00000000038b7b6d (/usr/bin/c+++0x38b7b6d) #30 0x0000000003773a0e (/usr/bin/c+++0x3773a0e) #31 0x000000000376efbe (/usr/bin/c+++0x376efbe) #32 0x0000000003142326 (/usr/bin/c+++0x3142326) #33 0x0000000003071904 (/usr/bin/c+++0x3071904) #34 0x00000000031fedf0 (/usr/bin/c+++0x31fedf0) #35 0x000000000248c33b (/usr/bin/c+++0x248c33b) #36 0x000000000249965c (/usr/bin/c+++0x249965c) #37 0x0000000002eeb83e (/usr/bin/c+++0x2eeb83e) #38 0x0000000005503422 (/usr/bin/c+++0x5503422) #39 0x0000000002eeafcc (/usr/bin/c+++0x2eeafcc) #40 0x0000000002eaea3d (/usr/bin/c+++0x2eaea3d) #41 0x0000000002eaeccc (/usr/bin/c+++0x2eaeccc) #42 0x0000000002ec9b20 (/usr/bin/c+++0x2ec9b20) #43 0x0000000002498df1 (/usr/bin/c+++0x2498df1) c++: error: clang frontend command failed with exit code 139 (use -v to see invocation) FreeBSD clang version 19.1.7 (https://github.com/llvm/llvm-project.git llvmorg-19.1.7-0-gcd708029e0b2) Target: x86_64-unknown-freebsd13.5 Thread model: posix InstalledDir: /usr/bin c++: note: diagnostic msg: ******************** PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT: Preprocessed source(s) and associated run script(s) are located at: c++: note: diagnostic msg: /tmp/WendlandC2KernelInst2d-3235f8.cpp c++: note: diagnostic msg: /tmp/WendlandC2KernelInst2d-3235f8.sh c++: note: diagnostic msg: ******************** *** [src/Kernel/CMakeFiles/Spheral_Kernel.dir/WendlandC2KernelInst2d.cc.o] Error code 1 make[2]: stopped in /wrkdirs/usr/ports/science/spheral/work/.build 1 error make[2]: stopped in /wrkdirs/usr/ports/science/spheral/work/.build *** [src/Kernel/CMakeFiles/Spheral_Kernel.dir/all] Error code 2 make[1]: stopped in /wrkdirs/usr/ports/science/spheral/work/.build --- src/KernelIntegrator/CMakeFiles/Spheral_KernelIntegrator.dir/all --- *** [src/KernelIntegrator/CMakeFiles/Spheral_KernelIntegrator.dir/all] Error code 6 make[1]: stopped in /wrkdirs/usr/ports/science/spheral/work/.build --- src/Material/CMakeFiles/Spheral_Material.dir/all --- *** [src/Material/CMakeFiles/Spheral_Material.dir/all] Error code 6 make[1]: stopped in /wrkdirs/usr/ports/science/spheral/work/.build 3 errors make[1]: stopped in /wrkdirs/usr/ports/science/spheral/work/.build *** [all] Error code 2 make: stopped in /wrkdirs/usr/ports/science/spheral/work/.build 1 error make: stopped in /wrkdirs/usr/ports/science/spheral/work/.build ===> Compilation failed unexpectedly. Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to the maintainer. *** Error code 1 Stop. make: stopped in /usr/ports/science/spheral
