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Maintainer: [email protected] Log URL: https://pkg-status.freebsd.org/beefy24/data/main-amd64-default/p142569cd0b2b_s1bef5535c1f/logs/bagel-1.2.2.132_19.log Build URL: https://pkg-status.freebsd.org/beefy24/build.html?mastername=main-amd64-default&build=p142569cd0b2b_s1bef5535c1f Log: =>> Building science/bagel build started at Sat May 9 08:38:26 UTC 2026 port directory: /usr/ports/science/bagel package name: bagel-1.2.2.132_19 building for: FreeBSD main-amd64-default-job-45 16.0-CURRENT FreeBSD 16.0-CURRENT 1600018 amd64 maintained by: [email protected] Makefile datestamp: -rw-r--r-- 1 root wheel 1994 Apr 23 01:01 /usr/ports/science/bagel/Makefile Ports top last git commit: 142569cd0b2bd7c606dce1694dbcedeadfd212db Ports top unclean checkout: no Port dir last git commit: b8b84d83e93192cabd9e9f7d28d20373eb95e68f Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.8 Host OSVERSION: 1600014 Jail OSVERSION: 1600018 Job Id: 45 !!! Jail is newer than host. (Jail: 1600018, Host: 1600014) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/sh OSVERSION=1600018 UNAME_v=FreeBSD 16.0-CURRENT 1600018 UNAME_r=16.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.8 MASTERMNT=/usr/local/poudriere/data/.m/main-amd64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/main-amd64-default/45/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=main-amd64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.8 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for bagel-1.2.2.132_19: LIBXC=on: Build DFT with libxc MPI=on: MPI (Message Passing Interface) support SCALAPACK=on: Use ScaLapack library for parallelized linear algebra SMITH=on: Compile SMITH generated code ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --datarootdir=/usr/local/share/bagel --with-libxc --with-mpi=openmpi --enable-scalapack --enable-smith --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran14" F90="gfortran14" FC="gfortran14" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc14" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc14" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc14" MAKE=/usr/local/bin/gmake PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/bagel/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/bagel/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/bagel/work/.cache HOME=/wrkdirs/usr/ports/science/bagel/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/bagel/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/bagel/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objc opy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" STRIP="/usr/local/bin/strip" DEFAULT_AUTOCONF=2.73 CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran14" F90="gfortran14" FC="gfortran14" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc14" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc14" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc14" XDG_DATA_HOME=/wrkdirs/usr/ports/science/bagel/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/bagel/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/bagel/work/.cache HOME=/wrkdirs/usr/ports/science/bagel/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/bagel/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/bagel/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/ob jdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" STRIP="/usr/local/bin/strip" DEFAULT_AUTOCONF=2.73 PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -lscalapack -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc14 -L/usr/local/lib/gcc14 " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++11 " CXXSTD=c++11 BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd16 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=16.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/bagel" EXAMPLESDIR="share/examples/bagel" DATADIR="share/bagel" WWWDIR="www/bagel" ETCDIR="etc/bagel" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd16 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/bagel DOCSDIR=/usr/local/share/doc/bagel EXAMPLESDIR=/usr/local/share/examples/bagel WWWDIR=/usr/local/www/bagel ETCDIR=/usr/local/etc/bagel --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv3 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> bagel-1.2.2.132_19 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.7.5.pkg [main-amd64-default-job-45] Installing pkg-2.7.5... [main-amd64-default-job-45] Extracting pkg-2.7.5: .......... done ===> bagel-1.2.2.132_19 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of bagel-1.2.2.132_19 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by bagel-1.2.2.132_19 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by bagel-1.2.2.132_19 for building => SHA256 Checksum OK for qsimulate-open-bagel-v1.2.2-132-g2955e4d1a_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by bagel-1.2.2.132_19 for building ===> Extracting for bagel-1.2.2.132_19 => SHA256 Checksum OK for qsimulate-open-bagel-v1.2.2-132-g2955e4d1a_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for bagel-1.2.2.132_19 ===> Applying FreeBSD patches for bagel-1.2.2.132_19 from /usr/ports/science/bagel/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> bagel-1.2.2.132_19 depends on executable: gfortran14 - not found ===> Installing existing package /packages/All/gcc14-14.2.0_4.pkg [main-amd64-default-job-45] Installing gcc14-14.2.0_4... [main-amd64-default-job-45] `-- Installing binutils-2.44,1... [main-amd64-default-job-45] | `-- Installing indexinfo-0.3.1_1... [main-amd64-default-job-45] | `-- Extracting indexinfo-0.3.1_1: .... done [main-amd64-default-job-45] | `-- Installing zstd-1.5.7_1... [main-amd64-default-job-45] | `-- Extracting zstd-1.5.7_1: .......... done [main-amd64-default-job-45] `-- Extracting binutils-2.44,1: .......... done <snip> In file included from ../../../src/wfn/reference.h:30: In file included from ../../../src/mat1e/hcore.h:29: In file included from ../../../src/wfn/hcoreinfo.h:29: In file included from ../../../src/molecule/molecule.h:29: In file included from ../../../src/molecule/atom.h:29: In file included from ../../../src/molecule/shell.h:29: In file included from ../../../src/util/math/zmatrix.h:30: In file included from ../../../src/util/math/matrix.h:32: In file included from ../../../src/util/math/matrix_base.h:33: In file included from ../../../src/util/math/vectorb.h:30: In file included from ../../../src/util/math/btas_interface.h:38: In file included from ../../../btas/btas.h:8: In file included from ../../../btas/generic/axpy_impl.h:8: In file included from ../../../btas/tensor.h:11: In file included from ../../../btas/defaults.h:15: In file included from ../../../btas/range.h:27: ../../../btas/util/functional.h:37:59: warning: 'unary_function<const std::pair<btas::varray<long>, long> &, const long &>' is deprecated [-Wdeprecated-declarations] 37 | struct second_of_pair< std::pair<T1,T2> > : public std::unary_function<const std::pair<T1,T2>&,const T2&> { | ^ /usr/local/include/boost/iterator/transform_iterator.hpp:35:27: note: in instantiation of template class 'btas::second_of_pair<std::pair<btas::varray<long>, long>>' requested here 35 | using type = decltype(std::declval< UnaryFunc const& >()(std::declval< typename std::iterator_traits< Iterator >::reference >())); | ^ /usr/local/include/boost/iterator/detail/eval_if_default.hpp:34:27: note: in instantiation of template class 'boost::iterators::detail::transform_iterator_default_reference<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>>' requested here 34 | using type = typename DefaultNullaryFn::type; | ^ /usr/local/include/boost/iterator/detail/eval_if_default.hpp:38:1: note: in instantiation of template class 'boost::iterators::detail::eval_if_default<boost::use_default, boost::iterators::detail::transform_iterator_default_reference<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>>>' requested here 38 | using eval_if_default_t = typename eval_if_default< T, DefaultNullaryFn, NondefaultNullaryFn >::type; | ^ /usr/local/include/boost/iterator/transform_iterator.hpp:45:31: note: in instantiation of template type alias 'eval_if_default_t' requested here 45 | using reference = detail::eval_if_default_t< | ^ /usr/local/include/boost/iterator/transform_iterator.hpp:74:20: note: in instantiation of template class 'boost::iterators::detail::transform_iterator_base<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>, boost::use_default, boost::use_default>' requested here 74 | public detail::transform_iterator_base< UnaryFunc, Iterator, Reference, Value >::type, | ^ ../../../btas/tensorview_iterator.h:48:24: note: in instantiation of template class 'boost::iterators::transform_iterator<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>>' requested here 48 | typedef typename iterator::value_type ordinal_type; | ^ ../../../src/util/math/vectorb.h:63:71: note: in instantiation of template class 'btas::TensorViewIterator<btas::RangeNd<CblasColMajor>, const bagel::varray<double>>' requested here 63 | const DataType* data() const { /*assert(contiguous());*/ return &*cbegin(); } | ^ ../../../src/util/math/matop.h:357:55: note: in instantiation of member function 'bagel::VecView_<double>::data' requested here 357 | dger_(a.extent(0), b.extent(0), 1.0, a.data(), 1, b.data(), 1, out.data(), a.extent(0)); | ^ /usr/include/c++/v1/__functional/unary_function.h:23:8: note: 'unary_function<const std::pair<btas::varray<long>, long> &, const long &>' has been explicitly marked deprecated here 23 | struct _LIBCPP_DEPRECATED_IN_CXX11 unary_function { | ^ /usr/include/c++/v1/__config:728:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11' 728 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED | ^ /usr/include/c++/v1/__config:713:49: note: expanded from macro '_LIBCPP_DEPRECATED' 713 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__)) | ^ moldenin.cc:208:16: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 208 | moinfo.eig = move(*eig); | ^ | std:: moldenin.cc:209:18: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 209 | moinfo.occup = move(*occup); | ^ | std:: moldenin.cc:211:19: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 211 | moinfo.eigB = move(*eigB); | ^ | std:: moldenin.cc:212:21: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 212 | moinfo.occupB = move(*occupB); | ^ | std:: In file included from moldenout.cc:25: In file included from ../../../src/util/io/moldenout.h:28: In file included from ../../../src/util/io/moldenio.h:31: In file included from ../../../src/wfn/reference.h:30: In file included from ../../../src/mat1e/hcore.h:29: In file included from ../../../src/wfn/hcoreinfo.h:29: In file included from ../../../src/molecule/molecule.h:29: In file included from ../../../src/molecule/atom.h:29: In file included from ../../../src/molecule/shell.h:29: In file included from ../../../src/util/math/zmatrix.h:30: In file included from ../../../src/util/math/matrix.h:32: In file included from ../../../src/util/math/matrix_base.h:33: In file included from ../../../src/util/math/vectorb.h:30: In file included from ../../../src/util/math/btas_interface.h:38: In file included from ../../../btas/btas.h:8: In file included from ../../../btas/generic/axpy_impl.h:8: In file included from ../../../btas/tensor.h:11: In file included from ../../../btas/defaults.h:15: In file included from ../../../btas/range.h:27: ../../../btas/util/functional.h:37:59: warning: 'unary_function<const std::pair<btas::varray<long>, long> &, const long &>' is deprecated [-Wdeprecated-declarations] 37 | struct second_of_pair< std::pair<T1,T2> > : public std::unary_function<const std::pair<T1,T2>&,const T2&> { | ^ /usr/local/include/boost/iterator/transform_iterator.hpp:35:27: note: in instantiation of template class 'btas::second_of_pair<std::pair<btas::varray<long>, long>>' requested here 35 | using type = decltype(std::declval< UnaryFunc const& >()(std::declval< typename std::iterator_traits< Iterator >::reference >())); | ^ /usr/local/include/boost/iterator/detail/eval_if_default.hpp:34:27: note: in instantiation of template class 'boost::iterators::detail::transform_iterator_default_reference<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>>' requested here 34 | using type = typename DefaultNullaryFn::type; | ^ /usr/local/include/boost/iterator/detail/eval_if_default.hpp:38:1: note: in instantiation of template class 'boost::iterators::detail::eval_if_default<boost::use_default, boost::iterators::detail::transform_iterator_default_reference<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>>>' requested here 38 | using eval_if_default_t = typename eval_if_default< T, DefaultNullaryFn, NondefaultNullaryFn >::type; | ^ /usr/local/include/boost/iterator/transform_iterator.hpp:45:31: note: in instantiation of template type alias 'eval_if_default_t' requested here 45 | using reference = detail::eval_if_default_t< | ^ /usr/local/include/boost/iterator/transform_iterator.hpp:74:20: note: in instantiation of template class 'boost::iterators::detail::transform_iterator_base<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>, boost::use_default, boost::use_default>' requested here 74 | public detail::transform_iterator_base< UnaryFunc, Iterator, Reference, Value >::type, | ^ ../../../btas/tensorview_iterator.h:48:24: note: in instantiation of template class 'boost::iterators::transform_iterator<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>>' requested here 48 | typedef typename iterator::value_type ordinal_type; | ^ ../../../src/util/math/vectorb.h:63:71: note: in instantiation of template class 'btas::TensorViewIterator<btas::RangeNd<CblasColMajor>, const bagel::varray<double>>' requested here 63 | const DataType* data() const { /*assert(contiguous());*/ return &*cbegin(); } | ^ ../../../src/util/math/matop.h:357:55: note: in instantiation of member function 'bagel::VecView_<double>::data' requested here 357 | dger_(a.extent(0), b.extent(0), 1.0, a.data(), 1, b.data(), 1, out.data(), a.extent(0)); | ^ /usr/include/c++/v1/__functional/unary_function.h:23:8: note: 'unary_function<const std::pair<btas::varray<long>, long> &, const long &>' has been explicitly marked deprecated here 23 | struct _LIBCPP_DEPRECATED_IN_CXX11 unary_function { | ^ /usr/include/c++/v1/__config:728:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11' 728 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED | ^ /usr/include/c++/v1/__config:713:49: note: expanded from macro '_LIBCPP_DEPRECATED' 713 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__)) | ^ In file included from moldenin.cc:26: In file included from ../../../src/util/io/moldenin.h:28: In file included from ../../../src/util/io/moldenio.h:31: In file included from ../../../src/wfn/reference.h:30: In file included from ../../../src/mat1e/hcore.h:29: In file included from ../../../src/wfn/hcoreinfo.h:29: In file included from ../../../src/molecule/molecule.h:29: In file included from ../../../src/molecule/atom.h:29: In file included from ../../../src/molecule/shell.h:29: In file included from ../../../src/util/math/zmatrix.h:30: In file included from ../../../src/util/math/matrix.h:32: In file included from ../../../src/util/math/matrix_base.h:33: In file included from ../../../src/util/math/vectorb.h:30: In file included from ../../../src/util/math/btas_interface.h:38: In file included from ../../../btas/btas.h:8: In file included from ../../../btas/generic/axpy_impl.h:8: In file included from ../../../btas/tensor.h:11: In file included from ../../../btas/defaults.h:15: In file included from ../../../btas/range.h:27: ../../../btas/util/functional.h:37:59: warning: 'unary_function<const std::pair<btas::varray<long>, long> &, const long &>' is deprecated [-Wdeprecated-declarations] 37 | struct second_of_pair< std::pair<T1,T2> > : public std::unary_function<const std::pair<T1,T2>&,const T2&> { | ^ /usr/local/include/boost/iterator/transform_iterator.hpp:35:27: note: in instantiation of template class 'btas::second_of_pair<std::pair<btas::varray<long>, long>>' requested here 35 | using type = decltype(std::declval< UnaryFunc const& >()(std::declval< typename std::iterator_traits< Iterator >::reference >())); | ^ /usr/local/include/boost/iterator/detail/eval_if_default.hpp:34:27: note: in instantiation of template class 'boost::iterators::detail::transform_iterator_default_reference<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>>' requested here 34 | using type = typename DefaultNullaryFn::type; | ^ /usr/local/include/boost/iterator/detail/eval_if_default.hpp:38:1: note: in instantiation of template class 'boost::iterators::detail::eval_if_default<boost::use_default, boost::iterators::detail::transform_iterator_default_reference<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>>>' requested here 38 | using eval_if_default_t = typename eval_if_default< T, DefaultNullaryFn, NondefaultNullaryFn >::type; | ^ /usr/local/include/boost/iterator/transform_iterator.hpp:45:31: note: in instantiation of template type alias 'eval_if_default_t' requested here 45 | using reference = detail::eval_if_default_t< | ^ /usr/local/include/boost/iterator/transform_iterator.hpp:74:20: note: in instantiation of template class 'boost::iterators::detail::transform_iterator_base<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>, boost::use_default, boost::use_default>' requested here 74 | public detail::transform_iterator_base< UnaryFunc, Iterator, Reference, Value >::type, | ^ ../../../btas/tensorview_iterator.h:48:24: note: in instantiation of template class 'boost::iterators::transform_iterator<btas::second_of_pair<std::pair<btas::varray<long>, long>>, btas::RangeIterator<std::pair<btas::varray<long>, long>, btas::RangeNd<CblasColMajor>>>' requested here 48 | typedef typename iterator::value_type ordinal_type; | ^ ../../../src/util/math/vectorb.h:63:71: note: in instantiation of template class 'btas::TensorViewIterator<btas::RangeNd<CblasColMajor>, const bagel::varray<double>>' requested here 63 | const DataType* data() const { /*assert(contiguous());*/ return &*cbegin(); } | ^ ../../../src/util/math/matop.h:357:55: note: in instantiation of member function 'bagel::VecView_<double>::data' requested here 357 | dger_(a.extent(0), b.extent(0), 1.0, a.data(), 1, b.data(), 1, out.data(), a.extent(0)); | ^ /usr/include/c++/v1/__functional/unary_function.h:23:8: note: 'unary_function<const std::pair<btas::varray<long>, long> &, const long &>' has been explicitly marked deprecated here 23 | struct _LIBCPP_DEPRECATED_IN_CXX11 unary_function { | ^ /usr/include/c++/v1/__config:728:41: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11' 728 | # define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED | ^ /usr/include/c++/v1/__config:713:49: note: expanded from macro '_LIBCPP_DEPRECATED' 713 | # define _LIBCPP_DEPRECATED __attribute__((__deprecated__)) | ^ 4 warnings and 5 errors generated. gmake[4]: *** [Makefile:408: moldenio.lo] Error 1 gmake[4]: *** Waiting for unfinished jobs.... 4 warnings and 5 errors generated. gmake[4]: *** [Makefile:408: moldenout.lo] Error 1 8 warnings and 5 errors generated. gmake[4]: *** [Makefile:408: moldenin.lo] Error 1 gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2-132-g2955e4d1a/src/util/io' gmake[3]: *** [Makefile:465: all-recursive] Error 1 gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2-132-g2955e4d1a/src/util' gmake[2]: *** [Makefile:633: all-recursive] Error 1 gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2-132-g2955e4d1a/src' gmake[1]: *** [Makefile:430: all-recursive] Error 1 gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/bagel/work/bagel-1.2.2-132-g2955e4d1a' gmake: *** [Makefile:362: all] Error 2 ===> Compilation failed unexpectedly. Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to the maintainer. *** Error code 1 Stop. make: stopped making "build" in /usr/ports/science/bagel
