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Maintainer: [email protected] Log URL: https://pkg-status.freebsd.org/ampere5/data/150arm64-default/e09c8d902664/logs/py311-netCDF4-1.7.2_2.log Build URL: https://pkg-status.freebsd.org/ampere5/build.html?mastername=150arm64-default&build=e09c8d902664 Log: =>> Building science/py-netCDF4 build started at Tue May 12 06:41:03 UTC 2026 port directory: /usr/ports/science/py-netCDF4 package name: py311-netCDF4-1.7.2_2 building for: FreeBSD 150arm64-default-job-06 15.0-RELEASE-p8 FreeBSD 15.0-RELEASE-p8 arm64 maintained by: [email protected] Makefile datestamp: -rw-r--r-- 1 root wheel 1649 May 7 01:02 /usr/ports/science/py-netCDF4/Makefile Ports top last git commit: e09c8d902664f49aa876230fa03a6d1228b9afa5 Ports top unclean checkout: no Port dir last git commit: 2bf3834a197ccf8956332378eda8dd7577965246 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.8 Host OSVERSION: 1600018 Jail OSVERSION: 1500068 Job Id: 06 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1500068 UNAME_v=FreeBSD 15.0-RELEASE-p8 UNAME_r=15.0-RELEASE-p8 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.8 MASTERMNT=/usr/local/poudriere/data/.m/150arm64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/150arm64-default/06/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=150arm64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/150arm64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.8 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for py311-netCDF4-1.7.2_2: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-netCDF4/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-netCDF4/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-netCDF4/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-netCDF4/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-netCDF4/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-netCDF4/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-netCDF4/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-netCDF4/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-netCDF4/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-netCDF4/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-netCDF4/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-netCDF4/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="inst all -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" PORTEXAMPLES="" PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd15 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/py311-netCDF4" EXAMPLESDIR="share/examples/py311-netCDF4" DATADIR="share/py311-netCDF4" WWWDIR="www/py311-netCDF4" ETCDIR="etc/py311-netCDF4" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd15 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_BASESUFFIX=311 PYTHON_TAG=.cpython-311 PYTHON_SOABI=.cpython-311 PYTHON_VER=3.11 PYTHON_BASEVER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/py311-netCDF4 DOCSDIR=/usr/local/share/doc/py311-netCDF4 EXAMPLESDIR=/usr/local/share/examples/py311-netCDF4 WWWDIR=/usr/local/www/py311-netCDF4 ETCDIR=/usr/local/etc/py311-netCDF4 --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (-y) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> NOTICE: The netCDF4 port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> License MIT accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-netCDF4-1.7.2_2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.7.5.pkg [150arm64-default-job-06] Installing pkg-2.7.5... [150arm64-default-job-06] Extracting pkg-2.7.5: .......... done ===> py311-netCDF4-1.7.2_2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-netCDF4-1.7.2_2 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> NOTICE: The netCDF4 port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> License MIT accepted by the user ===> Fetching all distfiles required by py311-netCDF4-1.7.2_2 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> NOTICE: The netCDF4 port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> License MIT accepted by the user ===> Fetching all distfiles required by py311-netCDF4-1.7.2_2 for building => SHA256 Checksum OK for netcdf4-1.7.2.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> NOTICE: The netCDF4 port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> License MIT accepted by the user ===> Fetching all distfiles required by py311-netCDF4-1.7.2_2 for building ===> Extracting for py311-netCDF4-1.7.2_2 => SHA256 Checksum OK for netcdf4-1.7.2.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py311-netCDF4-1.7.2_2 =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-netCDF4-1.7.2_2 depends on package: py311-numpy>=1.16 - not found ===> Installing existing package /packages/All/py311-numpy-2.4.4_2,1.pkg [150arm64-default-job-06] Installing py311-numpy-2.4.4_2,1... [150arm64-default-job-06] `-- Installing gcc14-14.2.0_4... [150arm64-default-job-06] | `-- Installing binutils-2.44,1... [150arm64-default-job-06] | | `-- Installing indexinfo-0.3.1_1... [150arm64-default-job-06] | | `-- Extracting indexinfo-0.3.1_1: .... done [150arm64-default-job-06] | | `-- Installing zstd-1.5.7_1... [150arm64-default-job-06] | | `-- Extracting zstd-1.5.7_1: .......... done [150arm64-default-job-06] | `-- Extracting binutils-2.44,1: .......... done [150arm64-default-job-06] | `-- Installing gmp-6.3.0... [150arm64-default-job-06] | `-- Extracting gmp-6.3.0: .......... done [150arm64-default-job-06] | `-- Installing mpc-1.4.1... [150arm64-default-job-06] | | `-- Installing mpfr-4.2.2,1... [150arm64-default-job-06] | | `-- Extracting mpfr-4.2.2,1: .......... done [150arm64-default-job-06] | `-- Extracting mpc-1.4.1: .......... done [150arm64-default-job-06] `-- Extracting gcc14-14.2.0_4: .......... done [150arm64-default-job-06] `-- Installing openblas-0.3.30,2... [150arm64-default-job-06] `-- Extracting openblas-0.3.30,2: .......... done [150arm64-default-job-06] `-- Installing python311-3.11.15_2... [150arm64-default-job-06] | `-- Installing gettext-runtime-1.0_1... [150arm64-default-job-06] | `-- Extracting gettext-runtime-1.0_1: .......... done [150arm64-default-job-06] | `-- Installing libffi-3.5.1... [150arm64-default-job-06] | `-- Extracting libffi-3.5.1: .......... done [150arm64-default-job-06] | `-- Installing mpdecimal-4.0.1... [150arm64-default-job-06] | `-- Extracting mpdecimal-4.0.1: .......... done [150arm64-default-job-06] | `-- Installing readline-8.3.3... [150arm64-default-job-06] | `-- Extracting readline-8.3.3: .......... done [150arm64-default-job-06] `-- Extracting python311-3.11.15_2: .......... done [150arm64-default-job-06] Extracting py311-numpy-2.4.4_2,1: .......... done ===== Message from gcc14-14.2.0_4: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc14 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from python311-3.11.15_2: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-netCDF4-1.7.2_2 depends on package: py311-numpy>=1.16 - found ===> Returning to build of py311-netCDF4-1.7.2_2 ===> py311-netCDF4-1.7.2_2 depends on package: py311-cython>=3.2.4 - not found ===> Installing existing package /packages/All/py311-cython-3.2.4.pkg [150arm64-default-job-06] Installing py311-cython-3.2.4... [150arm64-default-job-06] Extracting py311-cython-3.2.4: .......... done ===> py311-netCDF4-1.7.2_2 depends on package: py311-cython>=3.2.4 - found ===> Returning to build of py311-netCDF4-1.7.2_2 ===> py311-netCDF4-1.7.2_2 depends on package: py311-setuptools>=63.1.0 - not found ===> Installing existing package /packages/All/py311-setuptools-63.1.0_3.pkg [150arm64-default-job-06] Installing py311-setuptools-63.1.0_3... [150arm64-default-job-06] Extracting py311-setuptools-63.1.0_3: .......... done ===> py311-netCDF4-1.7.2_2 depends on package: py311-setuptools>=63.1.0 - found ===> Returning to build of py311-netCDF4-1.7.2_2 ===> py311-netCDF4-1.7.2_2 depends on file: /usr/local/bin/python3.11 - found =========================================================================== =======================<phase: lib-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-netCDF4-1.7.2_2 depends on shared library: libhdf5.so - not found ===> Installing existing package /packages/All/hdf5-1.12.2_2,1.pkg [150arm64-default-job-06] Installing hdf5-1.12.2_2,1... [150arm64-default-job-06] `-- Installing libaec-1.1.6... [150arm64-default-job-06] `-- Extracting libaec-1.1.6: .......... done [150arm64-default-job-06] Extracting hdf5-1.12.2_2,1: .......... done ===> py311-netCDF4-1.7.2_2 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so) ===> Returning to build of py311-netCDF4-1.7.2_2 ===> py311-netCDF4-1.7.2_2 depends on shared library: libnetcdf.so - not found ===> Installing existing package /packages/All/netcdf-4.10.0.pkg [150arm64-default-job-06] Installing netcdf-4.10.0... [150arm64-default-job-06] `-- Installing curl-8.20.0... [150arm64-default-job-06] | `-- Installing brotli-1.2.0,1... [150arm64-default-job-06] | `-- Extracting brotli-1.2.0,1: .......... done [150arm64-default-job-06] | `-- Installing libidn2-2.3.8... [150arm64-default-job-06] | | `-- Installing libunistring-1.4.2... [150arm64-default-job-06] | | `-- Extracting libunistring-1.4.2: .......... done [150arm64-default-job-06] | `-- Extracting libidn2-2.3.8: .......... done [150arm64-default-job-06] | `-- Installing libnghttp2-1.69.0... [150arm64-default-job-06] | `-- Extracting libnghttp2-1.69.0: .......... done [150arm64-default-job-06] | `-- Installing libpsl-0.21.5_2... [150arm64-default-job-06] | `-- Extracting libpsl-0.21.5_2: .......... done [150arm64-default-job-06] | `-- Installing libssh2-1.11.1,3... [150arm64-default-job-06] | `-- Extracting libssh2-1.11.1,3: .......... done [150arm64-default-job-06] `-- Extracting curl-8.20.0: .......... done [150arm64-default-job-06] `-- Installing pkgconf-2.4.3_1,1... [150arm64-default-job-06] `-- Extracting pkgconf-2.4.3_1,1: .......... done [150arm64-default-job-06] Extracting netcdf-4.10.0: .......... done ===> py311-netCDF4-1.7.2_2 depends on shared library: libnetcdf.so - found (/usr/local/lib/libnetcdf.so) ===> Returning to build of py311-netCDF4-1.7.2_2 =========================================================================== =======================<phase: configure >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py311-netCDF4-1.7.2_2 -L/usr/local/lib -lnetcdf -L/usr/local/lib -lhdf5 Traceback (most recent call last): File "<string>", line 1, in <module> File "setup.py", line 370, in <module> netcdf_lib_version = getnetcdfvers(lib_dirs) ^^^^^^^^^^^^^^^^^^^^^^^ File "setup.py", line 73, in getnetcdfvers import os, re, sys, ctypes File "/usr/local/lib/python3.11/ctypes/__init__.py", line 8, in <module> from _ctypes import Union, Structure, Array ImportError: /usr/local/lib/gcc14/libgcc_s.so.1: version GCC_4.6.0 required by /usr/local/lib/python3.11/lib-dynload/_ctypes.cpython-311.so not found reading from setup.cfg... using /usr/local/bin/nc-config... checking /usr/local/include... HDF5 library version: 1.12.2 headers found in /usr/local/include *** Error code 1 Stop. make: stopped making "configure" in /usr/ports/science/py-netCDF4
