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Maintainer: [email protected] Log URL: https://pkg-status.freebsd.org/beefy24/data/main-amd64-default/p8256516534c9_s3c5c55beee/logs/serac-g20260327.log Build URL: https://pkg-status.freebsd.org/beefy24/build.html?mastername=main-amd64-default&build=p8256516534c9_s3c5c55beee Log: =>> Building science/serac build started at Thu Aug 6 16:54:27 UTC 2026 port directory: /usr/ports/science/serac package name: serac-g20260327 building for: FreeBSD main-amd64-default-job-09 16.0-CURRENT FreeBSD 16.0-CURRENT 1600019 amd64 maintained by: [email protected] Makefile datestamp: -rw-r--r-- 1 root wheel 1763 Apr 2 01:01 /usr/ports/science/serac/Makefile Ports top last git commit: 8256516534c9551d83e0514b77a91b9db7715150 Ports top unclean checkout: no Port dir last git commit: 34247b360657834e4aed0c2e58181f9319ae4bfb Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.8 Host OSVERSION: 1600019 Jail OSVERSION: 1600019 Job Id: 09 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1600019 UNAME_v=FreeBSD 16.0-CURRENT 1600019 UNAME_r=16.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.8 MASTERMNT=/usr/local/poudriere/data/.m/main-amd64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/main-amd64-default/09/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=main-amd64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.8 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for serac-g20260327: ====> MPI (Message Passing Interface) support: you have to select exactly one of them MPICH=on: Parallel processing support via MPICH OPENMPI=off: Parallel processing support via Open MPI ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/serac/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/serac/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/serac/work/.cache HOME=/wrkdirs/usr/ports/science/serac/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/serac/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/serac/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " LUA_MODLIBDIR=/usr/local/lib/lua/5.4 LUA_MODSHAREDIR=/usr/local/share/lua/5.4 LUA_MODDOCSDIR=/usr/local/share/doc/lua54 LUA_INCDIR=/usr/local/include/lua54 LUA_LIBDIR=/usr/local/lib LUA_VER=5.4 LUA_VER_STR=54 XDG_DATA_HOME=/wrkdirs/usr/ports/science/serac/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/serac/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/serac/work/.cache HOME=/wrkdirs/usr/ports/science/serac/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/serac/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/serac/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/serac/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- MPICH="" NO_MPICH="@comment " OPENMPI="@comment " NO_OPENMPI="" CMAKE_BUILD_TYPE="release" LUA_MODLIBDIR=lib/lua/5.4 LUA_MODSHAREDIR=share/lua/5.4 LUA_MODDOCSDIR=share/doc/lua54 LUA_INCDIR=include/lua54 LUA_VER=5.4 LUA_VER_STR=54 OSREL=16.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/serac" EXAMPLESDIR="share/examples/serac" DATADIR="share/serac" WWWDIR="www/serac" ETCDIR="etc/serac" --End PLIST_SUB-- --SUB_LIST-- MPICH="" NO_MPICH="@comment " OPENMPI="@comment " NO_OPENMPI="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/serac DOCSDIR=/usr/local/share/doc/serac EXAMPLESDIR=/usr/local/share/examples/serac WWWDIR=/usr/local/www/serac ETCDIR=/usr/local/etc/serac --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (kbytes, -y) unlimited virtual machines (-V) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> serac-g20260327 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.8.1_1.pkg [main-amd64-default-job-09] Installing pkg-2.8.1_1... [main-amd64-default-job-09] Extracting pkg-2.8.1_1: .......... done ===> serac-g20260327 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of serac-g20260327 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by serac-g20260327 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by serac-g20260327 for building => SHA256 Checksum OK for LLNL-smith-g20260327-887c1cb_GH0.tar.gz. => SHA256 Checksum OK for LLNL-blt-2bf714a56d64b9b66b2a2b20207587af052efc36_GH0.tar.gz. => SHA256 Checksum OK for LLNL-gretl-fbbbee58b3d3b97771b107ca6e015a40dcf5e0f6_GH0.tar.gz. => SHA256 Checksum OK for LLNL-uberenv-bf2f438fc1fe97bb8290a11e5d4f2d56085b4ee3_GH0.tar.gz. => SHA256 Checksum OK for LLNL-serac_tests-75d838c69f48a0f263ad68a81d963a0615bed37f_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by serac-g20260327 for building ===> Extracting for serac-g20260327 => SHA256 Checksum OK for LLNL-smith-g20260327-887c1cb_GH0.tar.gz. => SHA256 Checksum OK for LLNL-blt-2bf714a56d64b9b66b2a2b20207587af052efc36_GH0.tar.gz. => SHA256 Checksum OK for LLNL-gretl-fbbbee58b3d3b97771b107ca6e015a40dcf5e0f6_GH0.tar.gz. => SHA256 Checksum OK for LLNL-uberenv-bf2f438fc1fe97bb8290a11e5d4f2d56085b4ee3_GH0.tar.gz. => SHA256 Checksum OK for LLNL-serac_tests-75d838c69f48a0f263ad68a81d963a0615bed37f_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for serac-g20260327 ===> Applying FreeBSD patches for serac-g20260327 from /usr/ports/science/serac/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> serac-g20260327 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-core-3.31.12_3.pkg [main-amd64-default-job-09] Installing cmake-core-3.31.12_3... [main-amd64-default-job-09] `-- Installing expat-2.8.2... [main-amd64-default-job-09] `-- Extracting expat-2.8.2: .......... done [main-amd64-default-job-09] `-- Installing jsoncpp-1.9.6_1... [main-amd64-default-job-09] `-- Extracting jsoncpp-1.9.6_1: .......... done [main-amd64-default-job-09] `-- Installing libidn2-2.3.8... [main-amd64-default-job-09] | `-- Installing indexinfo-0.3.1_1... [main-amd64-default-job-09] | `-- Extracting indexinfo-0.3.1_1: .... done [main-amd64-default-job-09] | `-- Installing libunistring-1.4.2... <snip> -- Yapf support is OFF -- CMakeFormat support is OFF -- Cppcheck support is OFF -- ClangQuery support is OFF -- ClangTidy support is OFF -- ClangApplyReplacements support is ON -- Failed to locate ClangApplyReplacements executable (missing: CLANGAPPLYREPLACEMENTS_EXECUTABLE) -- C Compiler family is Clang -- Adding optional BLT definitions and compiler flags -- Enabling all compiler warnings on all targets. -- Enabling treatment of warnings as errors on all targets. -- Fortran support disabled. -- CMAKE_C_FLAGS flags are: -Wall -Wextra -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Werror -- CMAKE_CXX_FLAGS flags are: -Wall -Wextra -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Werror -- CMAKE_EXE_LINKER_FLAGS flags are: -- CMake's C implicit link directories: /usr/lib -- CMake's CXX implicit link directories: /usr/lib -- CMake's C implicit link libraries: gcc;gcc_s;c;gcc;gcc_s -- CMake's CXX implicit link libraries: c++;m;gcc;gcc_s;c;gcc;gcc_s -- Using byVDIM degree-of-freedom vector ordering. -- Smith Code Checks: ON -- Checking for expected Camp target 'camp' -- Camp loaded: -- Camp support is ON -- Umpire support is OFF -- RAJA support is OFF CMake Deprecation Warning at /usr/local/lib/cmake/conduit/ConduitConfig.cmake:15 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument <min> value. Or, use the <min>...<max> syntax to tell CMake that the project requires at least <min> but has been updated to work with policies introduced by <max> or earlier. Call Stack (most recent call first): /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) cmake/thirdparty/SetupSmithThirdParty.cmake:113 (find_dependency) CMakeLists.txt:174 (include) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Conduit was built with HDF5 Support -- Looking for HDF5 at: /usr/local -- Found HDF5: hdf5-shared (found version "1.12.2") -- HDF5_DIR_REAL=/usr/local -- Checking that found HDF5_INCLUDE_DIRS are in HDF5_DIR -- HDF5_INCLUDE_DIRS=/usr/local/include -- /usr/local/include includes HDF5_DIR (/usr/local) -- /usr/local/include includes HDF5_REAL_DIR () -- HDF5 is parallel: false -- Found MPI: TRUE (found version "5.0") found components: C -- Found Conduit: /usr/local (found version 0.9.6) -- CONDUIT_VERSION = 0.9.6 -- CONDUIT_INSTALL_PREFIX = /usr/local -- CONDUIT_IMPORT_ROOT = /usr/local -- CONDUIT_USE_CXX14 = TRUE -- CONDUIT_USE_FMT = TRUE -- CONDUIT_USE_CALIPER = -- CONDUIT_USE_OPENMP = OFF -- CONDUIT_CUDA_ENABLED = -- CONDUIT_HIP_ENABLED = -- CONDUIT_INCLUDE_DIRS = /usr/local/include/conduit -- CONDUIT_FORTRAN_ENABLED = TRUE -- CONDUIT_PYTHON_ENABLED = -- CONDUIT_PYTHON_EXECUTABLE = -- CONDUIT_PYTHON_MODULE_DIR = python-modules/ -- CONDUIT_PYTHON_MODULE_CUSTOM_PREFIX = OFF -- Conduit Relay features: -- CONDUIT_RELAY_WEBSERVER_ENABLED = TRUE -- CONDUIT_RELAY_HDF5_ENABLED = TRUE -- CONDUIT_HDF5_DIR = /usr/local -- CONDUIT_RELAY_ADIOS_ENABLED = FALSE -- CONDUIT_ADIOS_DIR = -- CONDUIT_RELAY_SILO_ENABLED = TRUE -- CONDUIT_SILO_DIR = /usr/local -- CONDUIT_RELAY_MPI_ENABLED = TRUE -- CONDUIT_USE_CMAKE_MPI_TARGETS = TRUE -- Conduit imported targets: conduit::conduit conduit::conduit_mpi -- Checking for expected Conduit target 'conduit::conduit' -- Conduit loaded: /usr/local -- Conduit support is ON -- Sundials support is OFF -- PETSc support is OFF -- SLEPc support is OFF -- ARPACK support is FALSE -- Enzyme support is OFF -- Using installed MFEM -- Looking for MFEM using MFEM_DIR = /usr/local -- Using MFEM's CMake config file -- Found MFEM: mfem -- MFEM Includes: /usr/local/include;/usr/local/include -- MFEM Libraries: mfem -- Checking for expected MFEM target 'mfem' -- MFEM loaded: /usr/local -- Smith Enable Continuation: OFF -- Using installed Axom -- Found MPI: TRUE (found version "5.0") CMake Deprecation Warning at /usr/local/lib/cmake/conduit/ConduitConfig.cmake:15 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument <min> value. Or, use the <min>...<max> syntax to tell CMake that the project requires at least <min> but has been updated to work with policies introduced by <max> or earlier. Call Stack (most recent call first): /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) /usr/local/lib/cmake/axom-config.cmake:187 (find_dependency) /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) cmake/thirdparty/SetupSmithThirdParty.cmake:452 (find_dependency) CMakeLists.txt:174 (include) -- Conduit was built with HDF5 Support -- Looking for HDF5 at: /usr/local -- HDF5_DIR_REAL=/usr/local -- Checking that found HDF5_INCLUDE_DIRS are in HDF5_DIR -- HDF5_INCLUDE_DIRS=/usr/local/include -- /usr/local/include includes HDF5_DIR (/usr/local) -- /usr/local/include includes HDF5_REAL_DIR () -- HDF5 is parallel: false CMake Error at /usr/local/lib/cmake/conduit/conduit_setup_targets.cmake:65 (add_library): add_library cannot create imported target "conduit::conduit" because another target with the same name already exists. Call Stack (most recent call first): /usr/local/lib/cmake/conduit/ConduitConfig.cmake:88 (include) /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) /usr/local/lib/cmake/axom-config.cmake:187 (find_dependency) /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) cmake/thirdparty/SetupSmithThirdParty.cmake:452 (find_dependency) CMakeLists.txt:174 (include) CMake Error at /usr/local/lib/cmake/conduit/conduit_setup_targets.cmake:101 (add_library): add_library cannot create imported target "conduit::conduit_mpi" because another target with the same name already exists. Call Stack (most recent call first): /usr/local/lib/cmake/conduit/ConduitConfig.cmake:88 (include) /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) /usr/local/lib/cmake/axom-config.cmake:187 (find_dependency) /usr/local/share/cmake/Modules/CMakeFindDependencyMacro.cmake:76 (find_package) cmake/thirdparty/SetupSmithThirdParty.cmake:452 (find_dependency) CMakeLists.txt:174 (include) -- Found Conduit: /usr/local (found version 0.9.6) -- CONDUIT_VERSION = 0.9.6 -- CONDUIT_INSTALL_PREFIX = /usr/local -- CONDUIT_IMPORT_ROOT = /usr/local -- CONDUIT_USE_CXX14 = TRUE -- CONDUIT_USE_FMT = TRUE -- CONDUIT_USE_CALIPER = -- CONDUIT_USE_OPENMP = OFF -- CONDUIT_CUDA_ENABLED = -- CONDUIT_HIP_ENABLED = -- CONDUIT_INCLUDE_DIRS = /usr/local/include/conduit -- CONDUIT_FORTRAN_ENABLED = TRUE -- CONDUIT_PYTHON_ENABLED = -- CONDUIT_PYTHON_EXECUTABLE = -- CONDUIT_PYTHON_MODULE_DIR = python-modules/ -- CONDUIT_PYTHON_MODULE_CUSTOM_PREFIX = OFF -- Conduit Relay features: -- CONDUIT_RELAY_WEBSERVER_ENABLED = TRUE -- CONDUIT_RELAY_HDF5_ENABLED = TRUE -- CONDUIT_HDF5_DIR = /usr/local -- CONDUIT_RELAY_ADIOS_ENABLED = FALSE -- CONDUIT_ADIOS_DIR = -- CONDUIT_RELAY_SILO_ENABLED = TRUE -- CONDUIT_SILO_DIR = /usr/local -- CONDUIT_RELAY_MPI_ENABLED = TRUE -- CONDUIT_USE_CMAKE_MPI_TARGETS = TRUE -- Conduit imported targets: conduit::conduit conduit::conduit_mpi -- Removing non-existant include directories from Axom's dependencies... -- Checking for expected Axom target 'axom' -- Axom loaded: /usr/local -- Axom support is ON -- Smith Enable Gretl: ON -- Configuring Gretl version v0.0.1 -- Gretl Code Checks: OFF -- Tribol support is OFF -- Removing non-existant include directories from target[axom] -- Removing non-existant include directories from target[conduit] -- Removing non-existant include directories from target[conduit::conduit_mpi] -- Removing non-existant include directories from target[conduit::conduit] -- Removing non-existant include directories from target[conduit_relay_mpi] -- Removing non-existant include directories from target[conduit_relay_mpi_io] -- Removing non-existant include directories from target[conduit_blueprint] -- Removing non-existant include directories from target[conduit_blueprint_mpi] -- Adiak support is OFF -- Caliper support is OFF -- Configuring Smith version v0.0.1 -- Configuring incomplete, errors occurred! *** Error code 1 Stop. make: stopped making "configure" in /usr/ports/science/serac
