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Maintainer: [email protected] Log URL: https://pkg-status.freebsd.org/ampere2/data/main-arm64-default/p6f1fe399c86f_sfd79bf63442/logs/opsin-3.0.20190223_4.log Build URL: https://pkg-status.freebsd.org/ampere2/build.html?mastername=main-arm64-default&build=p6f1fe399c86f_sfd79bf63442 Log: =>> Building science/opsin build started at Wed Aug 12 09:41:49 UTC 2026 port directory: /usr/ports/science/opsin package name: opsin-3.0.20190223_4 building for: FreeBSD main-arm64-default-job-12 16.0-CURRENT FreeBSD 16.0-CURRENT 1600019 arm64 maintained by: [email protected] Makefile datestamp: -rw-r--r-- 1 root wheel 1880 May 19 01:05 /usr/ports/science/opsin/Makefile Ports top last git commit: 6f1fe399c86f8f58da684e9a032a701b932ac15c Ports top unclean checkout: no Port dir last git commit: b6f9a7d72bae21abd4744db303f0063cadb296d2 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.8 Host OSVERSION: 1600019 Jail OSVERSION: 1600019 Job Id: 12 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1600019 UNAME_v=FreeBSD 16.0-CURRENT 1600019 UNAME_r=16.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.8 MASTERMNT=/usr/local/poudriere/data/.m/main-arm64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/main-arm64-default/12/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=main-arm64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/main-arm64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.8 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/opsin/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/opsin/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/opsin/work/.cache HOME=/wrkdirs/usr/ports/science/opsin/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/opsin/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/opsin/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- JAVA_HOME=/usr/local/openjdk25 XDG_DATA_HOME=/wrkdirs/usr/ports/science/opsin/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/opsin/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/opsin/work/.cache HOME=/wrkdirs/usr/ports/science/opsin/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/opsin/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/opsin/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,--fix-cortex-a53-843419 " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DA TA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=16.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/opsin" EXAMPLESDIR="share/examples/opsin" DATADIR="share/opsin" WWWDIR="www/opsin" ETCDIR="etc/opsin" --End PLIST_SUB-- --SUB_LIST-- JAVA=/usr/local/openjdk25/bin/java PORTNAME=opsin PORTVERSION=3.0.20190223 JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/opsin DOCSDIR=/usr/local/share/doc/opsin EXAMPLESDIR=/usr/local/share/examples/opsin WWWDIR=/usr/local/www/opsin ETCDIR=/usr/local/etc/opsin --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited pipebuf (kbytes, -y) unlimited virtual machines (-V) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> opsin-3.0.20190223_4 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.8.1_1.pkg [main-arm64-default-job-12] Installing pkg-2.8.1_1... [main-arm64-default-job-12] Extracting pkg-2.8.1_1: .......... done ===> opsin-3.0.20190223_4 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of opsin-3.0.20190223_4 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> Fetching all distfiles required by opsin-3.0.20190223_4 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> Fetching all distfiles required by opsin-3.0.20190223_4 for building => SHA256 Checksum OK for opsin-3.0.20190223.tar.gz. => SHA256 Checksum OK for opsin-3.0.20190223-deps.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> Fetching all distfiles required by opsin-3.0.20190223_4 for building ===> Extracting for opsin-3.0.20190223_4 => SHA256 Checksum OK for opsin-3.0.20190223.tar.gz. => SHA256 Checksum OK for opsin-3.0.20190223-deps.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for opsin-3.0.20190223_4 ===> Applying FreeBSD patches for opsin-3.0.20190223_4 from /usr/ports/science/opsin/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> opsin-3.0.20190223_4 depends on package: maven38>0 - not found ===> Installing existing package /packages/All/maven38-3.8.9_3.pkg [main-arm64-default-job-12] Installing maven38-3.8.9_3... [main-arm64-default-job-12] `-- Installing maven-wrapper-2... [main-arm64-default-job-12] `-- Extracting maven-wrapper-2: ... done [main-arm64-default-job-12] `-- Installing openjdk25-25.0.4+7.f.1... [main-arm64-default-job-12] | `-- Installing alsa-lib-1.2.16.1... [main-arm64-default-job-12] | `-- Extracting alsa-lib-1.2.16.1: .......... done [main-arm64-default-job-12] | `-- Installing fontconfig-2.17.1,1... [main-arm64-default-job-12] | | `-- Installing expat-2.8.2... [main-arm64-default-job-12] | | `-- Extracting expat-2.8.2: .......... done [main-arm64-default-job-12] | | `-- Installing freetype2-2.14.3... [main-arm64-default-job-12] | | `-- Installing brotli-1.2.0,1... [main-arm64-default-job-12] | | `-- Extracting brotli-1.2.0,1: .......... done [main-arm64-default-job-12] | | `-- Installing png-1.6.58... [main-arm64-default-job-12] | | `-- Extracting png-1.6.58: .......... done [main-arm64-default-job-12] | | `-- Extracting freetype2-2.14.3: .......... done [main-arm64-default-job-12] | | `-- Installing gettext-runtime-1.0_1... [main-arm64-default-job-12] | | `-- Installing indexinfo-0.3.1_1... [main-arm64-default-job-12] | | `-- Extracting indexinfo-0.3.1_1: .... done [main-arm64-default-job-12] | | `-- Extracting gettext-runtime-1.0_1: .......... done [main-arm64-default-job-12] | `-- Extracting fontconfig-2.17.1,1: .......... done <snip> [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] Copying 141 resources [INFO] [INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ opsin-core --- [INFO] Changes detected - recompiling the module! [INFO] Compiling 80 source files to /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-core/target/classes [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ opsin-core --- [INFO] Not copying test resources [INFO] [INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ opsin-core --- [INFO] Not compiling test sources [INFO] [INFO] --- maven-surefire-plugin:2.22.1:test (default-test) @ opsin-core --- [INFO] Tests are skipped. [INFO] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ opsin-core --- [INFO] Building jar: /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-core/target/opsin-core-3.0-SNAPSHOT.jar [INFO] [INFO] --- maven-install-plugin:2.4:install (default-install) @ opsin-core --- [INFO] Installing /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-core/target/opsin-core-3.0-SNAPSHOT.jar to /wrkdirs/usr/ports/science/opsin/work/.m2/repository/uk/ac/cam/ch/opsin/opsin-core/3.0-SNAPSHOT/opsin-core-3.0-SNAPSHOT.jar [INFO] Installing /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-core/pom.xml to /wrkdirs/usr/ports/science/opsin/work/.m2/repository/uk/ac/cam/ch/opsin/opsin-core/3.0-SNAPSHOT/opsin-core-3.0-SNAPSHOT.pom [INFO] [INFO] --- maven-enforcer-plugin:1.2:enforce (enforce-maven) @ opsin-core --- [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ opsin-core --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] Copying 141 resources [INFO] [INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ opsin-core --- [INFO] Nothing to compile - all classes are up to date [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ opsin-core --- [INFO] Not copying test resources [INFO] [INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ opsin-core --- [INFO] Not compiling test sources [INFO] [INFO] --- maven-surefire-plugin:2.22.1:test (default-test) @ opsin-core --- [INFO] Tests are skipped. [INFO] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ opsin-core --- [INFO] Building jar: /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-core/target/opsin-core-3.0-SNAPSHOT.jar [INFO] [INFO] -------------------< uk.ac.cam.ch.opsin:opsin-inchi >------------------- [INFO] Building OPSIN_InChI_Support 3.0-SNAPSHOT [3/3] [INFO] from opsin-inchi/pom.xml [INFO] --------------------------------[ jar ]--------------------------------- [INFO] [INFO] --- maven-enforcer-plugin:1.2:enforce (enforce-maven) @ opsin-inchi --- [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ opsin-inchi --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-inchi/src/main/resources [INFO] [INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ opsin-inchi --- [INFO] Changes detected - recompiling the module! [INFO] Compiling 2 source files to /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-inchi/target/classes [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ opsin-inchi --- [INFO] Not copying test resources [INFO] [INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ opsin-inchi --- [INFO] Not compiling test sources [INFO] [INFO] --- maven-surefire-plugin:2.22.1:test (default-test) @ opsin-inchi --- [INFO] Tests are skipped. [INFO] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ opsin-inchi --- [INFO] Building jar: /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-inchi/target/opsin-inchi-3.0-SNAPSHOT.jar [INFO] [INFO] --- maven-install-plugin:2.4:install (default-install) @ opsin-inchi --- [INFO] Installing /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-inchi/target/opsin-inchi-3.0-SNAPSHOT.jar to /wrkdirs/usr/ports/science/opsin/work/.m2/repository/uk/ac/cam/ch/opsin/opsin-inchi/3.0-SNAPSHOT/opsin-inchi-3.0-SNAPSHOT.jar [INFO] Installing /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-inchi/pom.xml to /wrkdirs/usr/ports/science/opsin/work/.m2/repository/uk/ac/cam/ch/opsin/opsin-inchi/3.0-SNAPSHOT/opsin-inchi-3.0-SNAPSHOT.pom [INFO] [INFO] --- maven-enforcer-plugin:1.2:enforce (enforce-maven) @ opsin-inchi --- [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ opsin-inchi --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-inchi/src/main/resources [INFO] [INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ opsin-inchi --- [INFO] Nothing to compile - all classes are up to date [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ opsin-inchi --- [INFO] Not copying test resources [INFO] [INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ opsin-inchi --- [INFO] Not compiling test sources [INFO] [INFO] --- maven-surefire-plugin:2.22.1:test (default-test) @ opsin-inchi --- [INFO] Tests are skipped. [INFO] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ opsin-inchi --- [INFO] [INFO] ----------------------< uk.ac.cam.ch.opsin:opsin >---------------------- [INFO] Building OPSIN 3.0-SNAPSHOT [4/3] [INFO] from pom.xml [INFO] --------------------------------[ pom ]--------------------------------- [INFO] [INFO] >>> maven-assembly-plugin:2.2-beta-5:assembly (default-cli) > package @ opsin >>> [INFO] [INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> [INFO] Forking OPSIN 3.0-SNAPSHOT [INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> [INFO] [INFO] --- maven-enforcer-plugin:1.2:enforce (enforce-maven) @ opsin --- [INFO] [INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> [INFO] Forking OPSIN Core 3.0-SNAPSHOT [INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> [INFO] [INFO] --- maven-enforcer-plugin:1.2:enforce (enforce-maven) @ opsin-core --- [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ opsin-core --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] Copying 141 resources [INFO] [INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ opsin-core --- [INFO] Nothing to compile - all classes are up to date [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ opsin-core --- [INFO] Not copying test resources [INFO] [INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ opsin-core --- [INFO] Not compiling test sources [INFO] [INFO] --- maven-surefire-plugin:2.22.1:test (default-test) @ opsin-core --- [INFO] Tests are skipped. [INFO] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ opsin-core --- [INFO] Building jar: /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-core/target/opsin-core-3.0-SNAPSHOT.jar [INFO] [INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> [INFO] Forking OPSIN_InChI_Support 3.0-SNAPSHOT [INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> [INFO] [INFO] --- maven-enforcer-plugin:1.2:enforce (enforce-maven) @ opsin-inchi --- [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ opsin-inchi --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-inchi/src/main/resources [INFO] [INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ opsin-inchi --- [INFO] Nothing to compile - all classes are up to date [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ opsin-inchi --- [INFO] Not copying test resources [INFO] [INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ opsin-inchi --- [INFO] Not compiling test sources [INFO] [INFO] --- maven-surefire-plugin:2.22.1:test (default-test) @ opsin-inchi --- [INFO] Tests are skipped. [INFO] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ opsin-inchi --- [INFO] [INFO] <<< maven-assembly-plugin:2.2-beta-5:assembly (default-cli) < package @ opsin <<< [INFO] [INFO] [INFO] --- maven-assembly-plugin:2.2-beta-5:assembly (default-cli) @ opsin --- [INFO] Reading assembly descriptor: fullAssembly.xml [WARNING] Cannot include project artifact: uk.ac.cam.ch.opsin:opsin:pom:3.0-SNAPSHOT; it doesn't have an associated file or directory. [INFO] Processing sources for module project: uk.ac.cam.ch.opsin:opsin-core:jar:3.0-SNAPSHOT [INFO] Processing sources for module project: uk.ac.cam.ch.opsin:opsin-inchi:jar:3.0-SNAPSHOT [WARNING] NOTE: Currently, inclusion of module dependencies may produce unpredictable results if a version conflict occurs. [WARNING] Archive: /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-core/target/opsin-core-3.0-SNAPSHOT.jar has already been added. Skipping. [WARNING] Archive: /wrkdirs/usr/ports/science/opsin/work/.m2/repository/dk/brics/automaton/automaton/1.11-8/automaton-1.11-8.jar has already been added. Skipping. [WARNING] Archive: /wrkdirs/usr/ports/science/opsin/work/.m2/repository/org/codehaus/woodstox/woodstox-core-asl/4.4.1/woodstox-core-asl-4.4.1.jar has already been added. Skipping. [WARNING] Archive: /wrkdirs/usr/ports/science/opsin/work/.m2/repository/javax/xml/stream/stax-api/1.0-2/stax-api-1.0-2.jar has already been added. Skipping. [WARNING] Archive: /wrkdirs/usr/ports/science/opsin/work/.m2/repository/org/codehaus/woodstox/stax2-api/3.1.4/stax2-api-3.1.4.jar has already been added. Skipping. [WARNING] Archive: /wrkdirs/usr/ports/science/opsin/work/.m2/repository/commons-io/commons-io/2.5/commons-io-2.5.jar has already been added. Skipping. [WARNING] Archive: /wrkdirs/usr/ports/science/opsin/work/.m2/repository/commons-cli/commons-cli/1.3.1/commons-cli-1.3.1.jar has already been added. Skipping. [WARNING] Archive: /wrkdirs/usr/ports/science/opsin/work/.m2/repository/log4j/log4j/1.2.17/log4j-1.2.17.jar has already been added. Skipping. [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for OPSIN 3.0-SNAPSHOT: [INFO] [INFO] OPSIN .............................................. FAILURE [ 3.677 s] [INFO] OPSIN Core ......................................... SUCCESS [ 17.646 s] [INFO] OPSIN_InChI_Support ................................ SUCCESS [ 0.455 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 23.504 s [INFO] Finished at: 2026-08-12T09:42:30Z [INFO] ------------------------------------------------------------------------ [ERROR] Failed to execute goal org.apache.maven.plugins:maven-assembly-plugin:2.2-beta-5:assembly (default-cli) on project opsin: Failed to create assembly: Error creating assembly archive jar-with-dependencies: Failed to retrieve numeric file attributes using: '/bin/sh -c ls -1nlaR /wrkdirs/usr/ports/science/opsin/work/dan2097-opsin-9b25f7546b67/opsin-core/src/main/java' -> [Help 1] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException *** Error code 1 Stop. make: stopped making "build" in /usr/ports/science/opsin
