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Maintainer: [email protected] Last committer: [email protected] Ident: $FreeBSD: head/biology/iqtree/Makefile 457467 2017-12-28 18:37:06Z jrm $ Log URL: http://package19.nyi.freebsd.org/data/103i386-default-build-as-user/457487/logs/iqtree-1.6.1.log Build URL: http://package19.nyi.freebsd.org/build.html?mastername=103i386-default-build-as-user&build=457487 Log: =>> Building biology/iqtree build started at Fri Dec 29 16:28:47 UTC 2017 port directory: /usr/ports/biology/iqtree package name: iqtree-1.6.1 building for: FreeBSD 103i386-default-build-as-user-job-14 10.3-RELEASE-p26 FreeBSD 10.3-RELEASE-p26 i386 maintained by: [email protected] Makefile ident: $FreeBSD: head/biology/iqtree/Makefile 457467 2017-12-28 18:37:06Z jrm $ Poudriere version: 3.2.3-18-gb2420da1 Host OSVERSION: 1200052 Jail OSVERSION: 1003000 Job Id: 14 ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 OSVERSION=1003000 UNAME_v=FreeBSD 10.3-RELEASE-p26 UNAME_r=10.3-RELEASE-p26 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM= MASTERMNT=/poudriere/data/.m/103i386-default-build-as-user/ref UID=0 PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk OLDPWD=/poudriere/data/.m/103i386-default-build-as-user/ref/.p P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS PWD=/poudriere/data/.m/103i386-default-build-as-user/ref/.p/pool MASTERNAME=103i386-default-build-as-user SCRIPTPREFIX=/usr/local/share/poudriere USER=root HOME=/root P_PYTHON_MAJOR_VER=2 POUDRIERE_VERSION=3.2.3-18-gb2420da1 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh GID=0 LIBEXECPREFIX=/usr/local/libexec/poudriere LOCALBASE=/usr/local POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for iqtree-1.6.1: EXAMPLES=on: Build and/or install examples ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- [email protected] --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/iqtree/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/iqtree/work HOME=/wrkdirs/usr/ports/biology/iqtree/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/iqtree/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/iqtree/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/iqtree/work HOME=/wrkdirs/usr/ports/biology/iqtree/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/iqtree/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes WITHOUT_DEBUG_FILES=yes WITHOUT_KERNEL_SYMBOLS=yes SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" DESTDIR=/wrkdirs/usr/ports/biology/iqtree/work/stage PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="gcc6" CFLAGS="-O2 -pipe -fstack-protector -Wl,-rpath=/usr/local/lib/gcc6 -fno-strict-aliasing" CPP="cpp6" CPPFL AGS="" LDFLAGS=" -fstack-protector -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6" LIBS="" CXX="g++6" CXXFLAGS="-O2 -pipe -fstack-protector -Wl,-rpath=/usr/local/lib/gcc6 -fno-strict-aliasing -Wl,-rpath=/usr/local/lib/gcc6" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" OSREL=10.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/iqtree" EXAMPLESDIR="share/examples/iqtree" DATADIR="share/iqtree" WWWDIR="www/iqtree" ETCDIR="etc/iqtree" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/iqtree DOCSDIR=/usr/local/share/doc/iqtree EXAMPLESDIR=/usr/local/share/examples/iqtree WWWDIR=/usr/local/www/iqtree ETCDIR=/usr/local/etc/iqtree --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles FORCE_PACKAGE=yes PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### ARCH=i386 CONFIGURE_MAX_CMD_LEN=262144 OPSYS=FreeBSD OSREL=10.3 OSVERSION=1003000 PYTHONBASE=/usr/local _OSRELEASE=10.3-RELEASE-p26 #### Misc Poudriere #### DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited sbsize (bytes, -b) unlimited pseudo-terminals (-p) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv2 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> iqtree-1.6.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.3_1.txz [103i386-default-build-as-user-job-14] Installing pkg-1.10.3_1... [103i386-default-build-as-user-job-14] Extracting pkg-1.10.3_1: .......... done ===> iqtree-1.6.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of iqtree-1.6.1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user => Cibiv-IQ-TREE-v1.6.1_GH0.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch https://codeload.github.com/Cibiv/IQ-TREE/tar.gz/v1.6.1?dummy=/Cibiv-IQ-TREE-v1.6.1_GH0.tar.gz fetch: https://codeload.github.com/Cibiv/IQ-TREE/tar.gz/v1.6.1?dummy=/Cibiv-IQ-TREE-v1.6.1_GH0.tar.gz: size unknown fetch: https://codeload.github.com/Cibiv/IQ-TREE/tar.gz/v1.6.1?dummy=/Cibiv-IQ-TREE-v1.6.1_GH0.tar.gz: size of remote file is not known Cibiv-IQ-TREE-v1.6.1_GH0.tar.gz 0 B 0 Bps => Fetched file size mismatch (expected 4481806, actual 4481835) => Trying next site => Attempting to fetch http://distcache.FreeBSD.org/ports-distfiles/Cibiv-IQ-TREE-v1.6.1_GH0.tar.gz fetch: http://distcache.FreeBSD.org/ports-distfiles/Cibiv-IQ-TREE-v1.6.1_GH0.tar.gz: Not Found => Couldn't fetch it - please try to retrieve this => port manually into /portdistfiles/ and try again. *** Error code 1 Stop. make: stopped in /usr/ports/biology/iqtree _______________________________________________ [email protected] mailing list https://lists.freebsd.org/mailman/listinfo/freebsd-pkg-fallout To unsubscribe, send any mail to "[email protected]"
