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Maintainer: po...@freebsd.org Last committer: b...@freebsd.org Ident: $FreeBSD: branches/2014Q1/science/avogadro/Makefile 336262 2013-12-12 14:15:03Z bapt $ Log URL: http://beefy1.isc.freebsd.org/bulk/10i386-quarterly/2013-12-16_15h18m40s/logs/avogadro-1.1.0_1.log Build URL: http://beefy1.isc.freebsd.org/bulk/10i386-quarterly/2013-12-16_15h18m40s Log: ====>> Building science/avogadro build started at Mon Dec 16 19:52:44 UTC 2013 port directory: /usr/ports/science/avogadro building for: FreeBSD 10i386-quarterly-job-18 10.0-RC1 FreeBSD 10.0-RC1 i386 maintained by: po...@freebsd.org Makefile ident: $FreeBSD: branches/2014Q1/science/avogadro/Makefile 336262 2013-12-12 14:15:03Z bapt $ Poudriere version: 3.1-pre ---Begin Environment--- UNAME_m=i386 UNAME_p=i386 OSVERSION=1000510 UNAME_v=FreeBSD 10.0-RC1 UNAME_r=10.0-RC1 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 MASTERMNT=/usr/local/poudriere/data/build/10i386-quarterly/ref PKG_EXT=txz tpid=11563 PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNG=1 PKGNAME=avogadro-1.1.0_1 PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f PKG_ADD=/usr/local/sbin/pkg-static add PWD=/home/bdrewery MASTERNAME=10i386-quarterly USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes PKG_VERSION=/poudriere/pkg-static version PKG_BIN=/usr/local/sbin/pkg-static ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for avogadro-1.1.0_1: PYTHON=on: Python bindings or support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --with-qt-includes=/usr/local/include/qt4 --with-qt-libraries=/usr/local/lib/qt4 --with-extra-libs=/usr/local/lib --with-extra-includes=/usr/local/include --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- TMPDIR="/tmp" TMPDIR="/tmp" PYTHON="/usr/local/bin/python2.7" MOC="/usr/local/bin/moc-qt4" UIC="/usr/local/bin/uic-qt4" LIBS="" QMAKE="/usr/local/bin/qmake-qt4" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-clang" QTDIR="/usr/local" PKG_CONFIG=pkgconf SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- TMPDIR="/tmp" TMPDIR="/tmp" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-clang" SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -idirafter /usr/local/include -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT="install -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 444" BSD_INSTALL_MAN="install -o root -g wheel -m 444" --End MAKE_ENV-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/avogadro DOCSDIR=/usr/local/share/doc/avogadro EXAMPLESDIR=/usr/local/share/examples/avogadro WWWDIR=/usr/local/www/avogadro ETCDIR=/usr/local/etc/avogadro --End SUB_LIST-- ---Begin make.conf--- ARCH=i386 MACHINE=i386 MACHINE_ARCH=i386 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### WITH_PKGNG=yes NO_RESTRICTED=yes DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ===> Cleaning for avogadro-1.1.0_1 =======================<phase: check-config >============================ =========================================================================== =======================<phase: pkg-depends >============================ ===> avogadro-1.1.0_1 depends on file: /usr/local/sbin/pkg - not found ===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg ===> Installing existing package /packages/All/pkg-1.2.4_1.txz Installing pkg-1.2.4_1... done If you are upgrading from the old package format, first run: # pkg2ng ===> Returning to build of avogadro-1.1.0_1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadro-1.1.0_1 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadro-1.1.0_1 for building => SHA256 Checksum OK for avogadro-1.1.0.tar.bz2. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by avogadro-1.1.0_1 for building ===> Extracting for avogadro-1.1.0_1 => SHA256 Checksum OK for avogadro-1.1.0.tar.bz2. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for avogadro-1.1.0_1 ===> Applying FreeBSD patches for avogadro-1.1.0_1 =========================================================================== =======================<phase: build-depends >============================ ===> avogadro-1.1.0_1 depends on file: /usr/local/libdata/pkgconfig/eigen2.pc - not found ===> Verifying install for /usr/local/libdata/pkgconfig/eigen2.pc in /usr/ports/math/eigen2 ===> Installing existing package /packages/All/eigen2-2.0.17,1.txz Installing eigen2-2.0.17,1... done ===> Returning to build of avogadro-1.1.0_1 ===> avogadro-1.1.0_1 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found ===> Verifying install for /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py in /usr/ports/math/py-numpy ===> Installing existing package /packages/All/py27-numpy-1.7.0_2,1.txz Installing py27-numpy-1.7.0_2,1...Installing suitesparse-4.0.2_2...Installing mpfr-3.1.2...Installing gmp-5.1.3... done done Installing mpc-1.0.1... done Installing lapack-3.4.2_1...Installing blas-3.4.2_1...Installing gcc-ecj-4.5... done Installing gcc-4.6.4...Installing binutils-2.23.2...Installing gettext-0.18.3.1... done done done done done done Installing python27-2.7.6_1... done Installing python2-2_2... done Installing python-2.7_1,2... done Installing py27-setuptools-1.1.7_1... done Installing py27-nose-1.3.0...185 208 done done ==== Note that some of the standard modules are provided as separate ports since they require extra dependencies: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter Install them as needed. ==== ===> Returning to build of avogadro-1.1.0_1 ===> avogadro-1.1.0_1 depends on package: py27-sip>0 - not found ===> Verifying install for py27-sip>0 in /usr/ports/devel/py-sip ===> Installing existing package /packages/All/py27-sip-4.15.2,1.txz Installing py27-sip-4.15.2,1... done ===> Returning to build of avogadro-1.1.0_1 ===> avogadro-1.1.0_1 depends on file: /usr/local/bin/python2.7 - found ===> avogadro-1.1.0_1 depends on executable: python - found ===> avogadro-1.1.0_1 depends on file: /usr/local/bin/cmake - not found ===> Verifying install for /usr/local/bin/cmake in /usr/ports/devel/cmake ===> Installing existing package /packages/All/cmake-2.8.12.1.txz Installing cmake-2.8.12.1...Installing cmake-modules-2.8.12.1... done done ===> Returning to build of avogadro-1.1.0_1 ===> avogadro-1.1.0_1 depends on executable: pkgconf - not found ===> Verifying install for pkgconf in /usr/ports/devel/pkgconf ===> Installing existing package /packages/All/pkgconf-0.9.3.txz Installing pkgconf-0.9.3... done ===> Returning to build of avogadro-1.1.0_1 ===> avogadro-1.1.0_1 depends on file: /usr/local/libdata/pkgconfig/glproto.pc - not found ===> Verifying install for /usr/local/libdata/pkgconfig/glproto.pc in /usr/ports/x11/glproto ===> Installing existing package /packages/All/glproto-1.4.16.txz Installing glproto-1.4.16... done ===> Returning to build of avogadro-1.1.0_1 ===> avogadro-1.1.0_1 depends on file: /usr/local/libdata/pkgconfig/dri2proto.pc - not found ===> Verifying install for /usr/local/libdata/pkgconfig/dri2proto.pc in /usr/ports/x11/dri2proto ===> Installing existing package /packages/All/dri2proto-2.8.txz Installing dri2proto-2.8... done ===> Returning to build of avogadro-1.1.0_1 ===> avogadro-1.1.0_1 depends on file: /usr/local/lib/qt4/libQtGui.so - not found ===> Verifying install for /usr/local/lib/qt4/libQtGui.so in /usr/ports/x11-toolkits/qt4-gui ===> Installing existing package /packages/All/qt4-gui-4.8.5.txz Installing qt4-gui-4.8.5...Installing dejavu-2.34...Installing expat-2.1.0... done Installing fontconfig-2.10.95,1...Installing freetype2-2.5.0.1... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: caching, new cache contents: 0 fonts, 1 dirs /usr/local/lib/X11/fonts/local: caching, new cache contents: 0 fonts, 0 dirs /root/.local/share/fonts: skipping, no such directory /root/.fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory /root/.cache/fontconfig: not cleaning non-existent cache directory /root/.fontconfig: not cleaning non-existent cache directory <snip> In file included from /usr/include/c++/v1/ios:216: /usr/include/c++/v1/__locale:440:48: error: too many arguments provided to function-like macro invocation const char_type* toupper(char_type* __low, const char_type* __high) const ^ /usr/local/include/python2.7/pyport.h:731:9: note: macro 'toupper' defined here #define toupper(c) towupper(btowc(c)) ^ In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp:31: In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pythontool_p.h:30: In file included from /usr/local/include/boost/python.hpp:11: In file included from /usr/local/include/boost/python/args.hpp:10: In file included from /usr/local/include/boost/python/args_fwd.hpp:10: In file included from /usr/local/include/boost/python/handle.hpp:11: In file included from /usr/local/include/boost/python/errors.hpp:13: In file included from /usr/local/include/boost/function/function0.hpp:11: In file included from /usr/local/include/boost/function/detail/maybe_include.hpp:13: In file included from /usr/local/include/boost/function/function_template.hpp:13: In file included from /usr/local/include/boost/function/detail/prologue.hpp:17: In file included from /usr/local/include/boost/function/function_base.hpp:20: In file included from /usr/local/include/boost/assert.hpp:82: In file included from /usr/include/c++/v1/iostream:38: In file included from /usr/include/c++/v1/ios:216: /usr/include/c++/v1/__locale:440:29: error: expected ';' at end of declaration list const char_type* toupper(char_type* __low, const char_type* __high) const ^ /usr/include/c++/v1/__locale:452:48: error: too many arguments provided to function-like macro invocation const char_type* tolower(char_type* __low, const char_type* __high) const ^ /usr/local/include/python2.7/pyport.h:729:9: note: macro 'tolower' defined here #define tolower(c) towlower(btowc(c)) ^ In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp:31: In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pythontool_p.h:30: In file included from /usr/local/include/boost/python.hpp:11: In file included from /usr/local/include/boost/python/args.hpp:10: In file included from /usr/local/include/boost/python/args_fwd.hpp:10: In file included from /usr/local/include/boost/python/handle.hpp:11: In file included from /usr/local/include/boost/python/errors.hpp:13: In file included from /usr/local/include/boost/function/function0.hpp:11: In file included from /usr/local/include/boost/function/detail/maybe_include.hpp:13: In file included from /usr/local/include/boost/function/function_template.hpp:13: In file included from /usr/local/include/boost/function/detail/prologue.hpp:17: In file included from /usr/local/include/boost/function/function_base.hpp:20: In file included from /usr/local/include/boost/assert.hpp:82: In file included from /usr/include/c++/v1/iostream:38: In file included from /usr/include/c++/v1/ios:216: /usr/include/c++/v1/__locale:436:27: error: use of undeclared identifier '__c' return do_toupper(__c); ^ /usr/include/c++/v1/__locale:543:15: error: C++ requires a type specifier for all declarations char_type toupper(char_type __c) const ^~~~~~~~~~~~~~~~~~~~~~ /usr/local/include/python2.7/pyport.h:731:29: note: expanded from macro 'toupper' #define toupper(c) towupper(btowc(c)) ^~~~~ In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp:31: In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pythontool_p.h:30: In file included from /usr/local/include/boost/python.hpp:11: In file included from /usr/local/include/boost/python/args.hpp:10: In file included from /usr/local/include/boost/python/args_fwd.hpp:10: In file included from /usr/local/include/boost/python/handle.hpp:11: In file included from /usr/local/include/boost/python/errors.hpp:13: In file included from /usr/local/include/boost/function/function0.hpp:11: In file included from /usr/local/include/boost/function/detail/maybe_include.hpp:13: In file included from /usr/local/include/boost/function/function_template.hpp:13: In file included from /usr/local/include/boost/function/detail/prologue.hpp:17: In file included from /usr/local/include/boost/function/function_base.hpp:20: In file included from /usr/local/include/boost/assert.hpp:82: In file included from /usr/include/c++/v1/iostream:38: In file included from /usr/include/c++/v1/ios:216: /usr/include/c++/v1/__locale:549:48: error: too many arguments provided to function-like macro invocation const char_type* toupper(char_type* __low, const char_type* __high) const ^ /usr/local/include/python2.7/pyport.h:731:9: note: macro 'toupper' defined here #define toupper(c) towupper(btowc(c)) ^ In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp:31: In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pythontool_p.h:30: In file included from /usr/local/include/boost/python.hpp:11: In file included from /usr/local/include/boost/python/args.hpp:10: In file included from /usr/local/include/boost/python/args_fwd.hpp:10: In file included from /usr/local/include/boost/python/handle.hpp:11: In file included from /usr/local/include/boost/python/errors.hpp:13: In file included from /usr/local/include/boost/function/function0.hpp:11: In file included from /usr/local/include/boost/function/detail/maybe_include.hpp:13: In file included from /usr/local/include/boost/function/function_template.hpp:13: In file included from /usr/local/include/boost/function/detail/prologue.hpp:17: In file included from /usr/local/include/boost/function/function_base.hpp:20: In file included from /usr/local/include/boost/assert.hpp:82: In file included from /usr/include/c++/v1/iostream:38: In file included from /usr/include/c++/v1/ios:216: /usr/include/c++/v1/__locale:549:29: error: expected ';' at end of declaration list const char_type* toupper(char_type* __low, const char_type* __high) const ^ /usr/include/c++/v1/__locale:561:48: error: too many arguments provided to function-like macro invocation const char_type* tolower(char_type* __low, const char_type* __high) const ^ /usr/local/include/python2.7/pyport.h:729:9: note: macro 'tolower' defined here #define tolower(c) towlower(btowc(c)) ^ In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp:31: In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pythontool_p.h:30: In file included from /usr/local/include/boost/python.hpp:11: In file included from /usr/local/include/boost/python/args.hpp:10: In file included from /usr/local/include/boost/python/args_fwd.hpp:10: In file included from /usr/local/include/boost/python/handle.hpp:11: In file included from /usr/local/include/boost/python/errors.hpp:13: In file included from /usr/local/include/boost/function/function0.hpp:11: In file included from /usr/local/include/boost/function/detail/maybe_include.hpp:13: In file included from /usr/local/include/boost/function/function_template.hpp:13: In file included from /usr/local/include/boost/function/detail/prologue.hpp:17: In file included from /usr/local/include/boost/function/function_base.hpp:20: In file included from /usr/local/include/boost/assert.hpp:82: In file included from /usr/include/c++/v1/iostream:38: In file included from /usr/include/c++/v1/ios:216: /usr/include/c++/v1/__locale:545:27: error: use of undeclared identifier '__c' return do_toupper(__c); ^ /usr/include/c++/v1/__locale:671:21: error: too many arguments provided to function-like macro invocation isspace(_CharT __c, const locale& __loc) ^ /usr/local/include/python2.7/pyport.h:725:9: note: macro 'isspace' defined here #define isspace(c) iswspace(btowc(c)) ^ In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp:31: In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pythontool_p.h:30: In file included from /usr/local/include/boost/python.hpp:11: In file included from /usr/local/include/boost/python/args.hpp:10: In file included from /usr/local/include/boost/python/args_fwd.hpp:10: In file included from /usr/local/include/boost/python/handle.hpp:11: In file included from /usr/local/include/boost/python/errors.hpp:13: In file included from /usr/local/include/boost/function/function0.hpp:11: In file included from /usr/local/include/boost/function/detail/maybe_include.hpp:13: In file included from /usr/local/include/boost/function/function_template.hpp:13: In file included from /usr/local/include/boost/function/detail/prologue.hpp:17: In file included from /usr/local/include/boost/function/function_base.hpp:20: In file included from /usr/local/include/boost/assert.hpp:82: In file included from /usr/include/c++/v1/iostream:38: In file included from /usr/include/c++/v1/ios:216: /usr/include/c++/v1/__locale:669:1: error: 'inline' can only appear on functions inline _LIBCPP_INLINE_VISIBILITY ^ /usr/include/c++/v1/__locale:671:1: error: variable 'isspace' declared as a template isspace(_CharT __c, const locale& __loc) ^ /usr/include/c++/v1/__locale:671:8: error: expected ';' at end of declaration isspace(_CharT __c, const locale& __loc) ^ /usr/include/c++/v1/__locale:672:1: error: expected unqualified-id { ^ /usr/include/c++/v1/__locale:695:21: error: too many arguments provided to function-like macro invocation isupper(_CharT __c, const locale& __loc) ^ /usr/local/include/python2.7/pyport.h:727:9: note: macro 'isupper' defined here #define isupper(c) iswupper(btowc(c)) ^ In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pluginmanager.cpp:31: In file included from /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0/libavogadro/src/pythontool_p.h:30: In file included from /usr/local/include/boost/python.hpp:11: In file included from /usr/local/include/boost/python/args.hpp:10: In file included from /usr/local/include/boost/python/args_fwd.hpp:10: In file included from /usr/local/include/boost/python/handle.hpp:11: In file included from /usr/local/include/boost/python/errors.hpp:13: In file included from /usr/local/include/boost/function/function0.hpp:11: In file included from /usr/local/include/boost/function/detail/maybe_include.hpp:13: In file included from /usr/local/include/boost/function/function_template.hpp:13: In file included from /usr/local/include/boost/function/detail/prologue.hpp:17: In file included from /usr/local/include/boost/function/function_base.hpp:20: In file included from /usr/local/include/boost/assert.hpp:82: In file included from /usr/include/c++/v1/iostream:38: In file included from /usr/include/c++/v1/ios:216: /usr/include/c++/v1/__locale:693:1: error: 'inline' can only appear on functions inline _LIBCPP_INLINE_VISIBILITY ^ /usr/include/c++/v1/__locale:695:1: error: variable 'isupper' declared as a template isupper(_CharT __c, const locale& __loc) ^ /usr/include/c++/v1/__locale:695:8: error: expected ';' at end of declaration isupper(_CharT __c, const locale& __loc) ^ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. *** Error code 1 Stop. make[3]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 *** Error code 1 Stop. make[2]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 *** Error code 1 Stop. make[1]: stopped in /wrkdirs/usr/ports/science/avogadro/work/avogadro-1.1.0 *** Error code 1 Stop. make: stopped in /usr/ports/science/avogadro ===> Cleaning for avogadro-1.1.0_1 _______________________________________________ freebsd-pkg-fallout@freebsd.org mailing list https://lists.freebsd.org/mailman/listinfo/freebsd-pkg-fallout To unsubscribe, send any mail to "freebsd-pkg-fallout-unsubscr...@freebsd.org"
