On Wed, Nov 5, 2014 at 7:37 PM, Natxo Asenjo <natxo.ase...@gmail.com> wrote:
> 6489.CRLIssuingPoint-MasterCRL - [03/Nov/2014:09:00:00 CET] [20] [3]
> FileBasedPublisher: java.io.FileNotFoundException:
> /var/lib/ipa/pki-ca/publish/MasterCRL-20141103-090000.temp (Permission
> denied)

And I think I found it:
https://fedorahosted.org/freeipa/ticket/3727


permissions of that folder:

$ ls -ld publish/
drwxr-xr-x. 2 root root 73728 Jun 13  2013 publish/

I just changed them to pkiuser:pkiuser, let's see what the next run does.

--
Groeten,
natxo

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