That's weird because the code is checking if a permission exists before it tries to add a new one

Can you try to remove 'System: Modify Certificate Profile' manually from LDAP and re-run ipa-server-upgrade?




On 11.10.2016 15:53, John Popowitch wrote:

2016-10-10T19:51:38Z DEBUG Updating managed permission: System: Modify Certificate Profile

2016-10-10T19:51:38Z DEBUG Destroyed connection context.ldap2_82077392

2016-10-10T19:51:38Z ERROR Upgrade failed with This entry already exists

2016-10-10T19:51:38Z DEBUG Traceback (most recent call last):

File "/usr/lib/python2.7/site-packages/ipaserver/install/upgradeinstance.py", line 306, in __upgrade

self.modified = (ld.update(self.files) or self.modified)

File "/usr/lib/python2.7/site-packages/ipaserver/install/ldapupdate.py", line 905, in update

self._run_updates(all_updates)

File "/usr/lib/python2.7/site-packages/ipaserver/install/ldapupdate.py", line 877, in _run_updates

self._run_update_plugin(update['plugin'])

File "/usr/lib/python2.7/site-packages/ipaserver/install/ldapupdate.py", line 852, in _run_update_plugin

    restart_ds, updates = self.api.Updater[plugin_name]()

File "/usr/lib/python2.7/site-packages/ipalib/frontend.py", line 1400, in __call__

    return self.execute(**options)

File "/usr/lib/python2.7/site-packages/ipaserver/install/plugins/update_managed_permissions.py", line 433, in execute

anonymous_read_aci)

File "/usr/lib/python2.7/site-packages/ipaserver/install/plugins/update_managed_permissions.py", line 529, in update_permission

ldap.add_entry(entry)

File "/usr/lib/python2.7/site-packages/ipapython/ipaldap.py", line 1428, in add_entry

self.conn.add_s(str(entry.dn), attrs.items())

  File "/usr/lib64/python2.7/contextlib.py", line 35, in __exit__

self.gen.throw(type, value, traceback)

File "/usr/lib/python2.7/site-packages/ipapython/ipaldap.py", line 938, in error_handler

    raise errors.DuplicateEntry()

DuplicateEntry: This entry already exists

2016-10-10T19:51:38Z DEBUG Traceback (most recent call last):

File "/usr/lib/python2.7/site-packages/ipaserver/install/service.py", line 418, in start_creation

run_step(full_msg, method)

File "/usr/lib/python2.7/site-packages/ipaserver/install/service.py", line 408, in run_step

    method()

File "/usr/lib/python2.7/site-packages/ipaserver/install/upgradeinstance.py", line 314, in __upgrade

    raise RuntimeError(e)

RuntimeError: This entry already exists

2016-10-10T19:51:38Z DEBUG [error] RuntimeError: This entry already exists

2016-10-10T19:51:38Z DEBUG   [cleanup]: stopping directory server

2016-10-10T19:51:38Z DEBUG Starting external process

2016-10-10T19:51:38Z DEBUG args='/bin/systemctl' 'stop' 'dirsrv@AWS-CAPPEX-COM.service'

2016-10-10T19:51:40Z DEBUG Process finished, return code=0

2016-10-10T19:51:40Z DEBUG stdout=

2016-10-10T19:51:40Z DEBUG stderr=

2016-10-10T19:51:40Z DEBUG   duration: 1 seconds

2016-10-10T19:51:40Z DEBUG   [cleanup]: restoring configuration

2016-10-10T19:51:40Z DEBUG Loading StateFile from '/var/lib/ipa/sysrestore/sysrestore.state'

2016-10-10T19:51:40Z DEBUG Loading StateFile from '/var/lib/ipa/sysrestore/sysrestore.state'

2016-10-10T19:51:40Z DEBUG Saving StateFile to '/var/lib/ipa/sysrestore/sysrestore.state'

2016-10-10T19:51:40Z DEBUG Loading StateFile from '/var/lib/ipa/sysrestore/sysrestore.state'

2016-10-10T19:51:40Z DEBUG Loading StateFile from '/var/lib/ipa/sysrestore/sysrestore.state'

2016-10-10T19:51:40Z DEBUG Saving StateFile to '/var/lib/ipa/sysrestore/sysrestore.state'

2016-10-10T19:51:40Z DEBUG Loading StateFile from '/var/lib/ipa/sysrestore/sysrestore.state'

2016-10-10T19:51:40Z DEBUG   duration: 0 seconds

2016-10-10T19:51:40Z ERROR IPA server upgrade failed: Inspect /var/log/ipaupgrade.log and run command ipa-server-upgrade manually.

2016-10-10T19:51:40Z DEBUG File "/usr/lib/python2.7/site-packages/ipapython/admintool.py", line 171, in execute

return_value = self.run()

File "/usr/lib/python2.7/site-packages/ipaserver/install/ipa_server_upgrade.py", line 50, in run

    raise admintool.ScriptError(str(e))

2016-10-10T19:51:40Z DEBUG The ipa-server-upgrade command failed, exception: ScriptError: ('IPA upgrade failed.', 1)

2016-10-10T19:51:40Z ERROR ('IPA upgrade failed.', 1)

*From:*Martin Basti [mailto:mba...@redhat.com]
*Sent:* Tuesday, October 11, 2016 1:53 AM
*To:* John Popowitch; freeipa-users@redhat.com
*Subject:* Re: [Freeipa-users] FreeIPA v4.2 stopped working, wants me to run ipa-server-upgrade, but has errors

On 10.10.2016 23:30, John Popowitch wrote:

    Hello FreeIPA community.

    I've inherited a group of three FreeIPA v4.2 servers on CentOS 7.2.

    I had to reboot one of the servers and now IPA won't run saying,
    "Upgrade required: please run ipa-server-upgrade command."

    But when I run ipa-server-upgrade I get an error:

    ipa: ERROR: Upgrade failed with This entry already exists

    When I run it in debug mode the last action before the error is:

    
ipa.ipaserver.install.plugins.update_managed_permissions.update_managed_permissions:
    DEBUG: Updating managed permission: System: Modify Certificate Profile

    It appears that several of the other managed permissions are
    processed successfully.

    When I look in the UI on one of the other servers it appears that
    this permission exists under IPA Server -> Role Based Access
    Control -> Permissions.

    I'm not familiar with FreeIPA so any help would be greatly
    appreciated.

    Thanks in advance.

    -John




Hello,

can you post the related part of ipaupgrade.log here?

Martin


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