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• [Freesurfer] fixing/editing white matter surface Eszter Boros
• [Freesurfer] Freesurfer remotely processing Gonzalo Rojas Costa
  • Re: [Freesurfer] Freesurfer remotely processing Fischl, Bruce R.,PHD
  • Re: [Freesurfer] Freesurfer remotely processing fsbuild
• [Freesurfer] NextBrain: no segment_fast or segment_fireants.py AmirHussein Abdolalizadeh
  • Re: [Freesurfer] NextBrain: no segment_fast or segment_fireants.py Iglesias Gonzalez, Juan E.
  • Re: [Freesurfer] NextBrain: no segment_fast or segment_fireants.py fsbuild
• [Freesurfer] longitudinal analyses, more than 2 timepoints Eszter Boros
  • Re: [Freesurfer] longitudinal analyses, more than 2 timepoints Huang, Yujing
  • Re: [Freesurfer] longitudinal analyses, more than 2 timepoints Eszter Boros
  • Re: [Freesurfer] longitudinal analyses, more than 2 timepoints Eszter Boros
  • Re: [Freesurfer] longitudinal analyses, more than 2 timepoints Huang, Yujing
• [Freesurfer] consensus on mp2rage or other t1w mri at 7T Jiaen Liu
  • [Freesurfer] NeuroQuant comparison? allio34...@aol.com
  • Re: [Freesurfer] NeuroQuant comparison? Fischl, Bruce R.,PHD
• [Freesurfer] aseg.mgz file not generated after recon-all Sara Rapuc
• Re: [Freesurfer] Missing Choroid Plexus Segmentation in final output Iglesias Gonzalez, Juan E.
• [Freesurfer] Issue with mri_histo_atlas_segment_fireants Command Taghizadeh Mortezaei, Nima
  • Re: [Freesurfer] Issue with mri_histo_atlas_segment_fireants Command Huang, Yujing
  • Re: [Freesurfer] Issue with mri_histo_atlas_segment_fireants Command Iglesias Gonzalez, Juan E.
• [Freesurfer] freeview slow in vnc Jiaen Liu
  • Re: [Freesurfer] freeview slow in vnc fsbuild
  • Re: [Freesurfer] freeview slow in vnc Jiaen Liu
• [Freesurfer] Postdoc Position - 7 Tesla MRI of Prefrontal Cortex - University of California, Berkeley Allison Chen
• [Freesurfer] SegmentAAN tool Todd L Richards
  • Re: [Freesurfer] SegmentAAN tool fsbuild
  • [Freesurfer] SegmentAAN tool Todd L Richards
  • [Freesurfer] SegmentAAN tool Todd L Richards
  • Re: [Freesurfer] SegmentAAN tool fsbuild
• [Freesurfer] Any updates on thalamic nuclei mask in MNI space? Melissa Thalhammer
  • Re: [Freesurfer] Any updates on thalamic nuclei mask in MNI space? Douglas N. Greve
• [Freesurfer] New user allio34...@aol.com
  • Re: [Freesurfer] New user Douglas N. Greve
  • Re: [Freesurfer] New user allio34...@aol.com
  • Re: [Freesurfer] New user Fischl, Bruce R.,PHD
  • Re: [Freesurfer] New user allio34...@aol.com
• [Freesurfer] Compatibility with M4 processor? Kayla Bohlke
  • Re: [Freesurfer] Compatibility with M4 processor? fsbuild
  • Re: [Freesurfer] Compatibility with M4 processor? Kayla Bohlke
  • Re: [Freesurfer] Compatibility with M4 processor? fsbuild
• [Freesurfer] copy headers Aaron Tanenbaum
  • Re: [Freesurfer] copy headers Douglas N. Greve
• Re: [Freesurfer] Error in recon-all Douglas N. Greve
  • Re: [Freesurfer] Error in recon-all Douglas N. Greve
  • Re: [Freesurfer] [WARNING: ATTACHMENT UNSCANNED]Re: Error in recon-all Douglas N. Greve
• [Freesurfer] Neuroimaging Analyst Position at University of Seville PATRICIA POMBO SEGURA
• Re: [Freesurfer] Freesurfer Digest, Vol 251, Issue 6 黄月虹
• [Freesurfer] registration error Ramesh Babu
  • Re: [Freesurfer] registration error Douglas N. Greve
  • Re: [Freesurfer] registration error Ramesh Babu
• [Freesurfer] How to Plot Surface with ROI Boundaries Using Harvard-Oxford Brain Atlas? Zeng, Xinglin
  • Re: [Freesurfer] How to Plot Surface with ROI Boundaries Using Harvard-Oxford Brain Atlas? Douglas N. Greve
  • [Freesurfer] 回复: How to Plot Surface with ROI Boundaries Using Harvard-Oxford Brain Atlas? Zeng, Xinglin
• Re: [Freesurfer] [ext] Re: Freeview crash fsbuild
• [Freesurfer] LME pipeline for individual ROIs Bondi, Daniel
  • Re: [Freesurfer] Fwd: LME pipeline for individual ROIs Diers, Kersten /DZNE
  • Re: [Freesurfer] Fwd: LME pipeline for individual ROIs Bondi, Daniel
• [Freesurfer] preparing config file for Tracula Barletta, Valeria
• [Freesurfer] Freeview crash Tietze, Anna
  • Re: [Freesurfer] Freeview crash Wang, Ruopeng
  • Re: [Freesurfer] [ext] Re: Freeview crash Tietze, Anna
  • Re: [Freesurfer] [ext] Re: Freeview crash Wang, Ruopeng
  • Re: [Freesurfer] [ext] Re: Freeview crash Tietze, Anna
  • [Freesurfer] WG: [ext] Re: Freeview crash Tietze, Anna
  • Re: [Freesurfer] [ext] Re: Freeview crash Wang, Ruopeng
  • Re: [Freesurfer] [ext] Re: Freeview crash Tietze, Anna
  • Re: [Freesurfer] [ext] Re: Freeview crash Wang, Ruopeng
  • Re: [Freesurfer] [ext] Re: Freeview crash Dicamillo, Robert
  • Re: [Freesurfer] Freeview crash fsbuild
  • Re: [Freesurfer] [ext] Re: Freeview crash Tietze, Anna
• Re: [Freesurfer] Recon-all Error: "ln: failed to create symbolic link 'lh.white.H': Operation not permitted" fsbuild
• Re: [Freesurfer] Freesurfer Digest, Vol 250, Issue 15 黄月虹
• Re: [Freesurfer] FreeSurfer 8.0.0-beta: Stack smashing and normalization failures with 7T MP2RAGE data fsbuild
  • Re: [Freesurfer] FreeSurfer 8.0.0-beta: Stack smashing and normalization failures with 7T MP2RAGE data Michael Eyre
  • Re: [Freesurfer] FreeSurfer 8.0.0-beta: Stack smashing and normalization failures with 7T MP2RAGE data Douglas N. Greve
• [Freesurfer] Reliability of Optic Chiasm Volume Measurements in FreeSurfer Knut J Bjuland
  • Re: [Freesurfer] Reliability of Optic Chiasm Volume Measurements in FreeSurfer Douglas N. Greve
• [Freesurfer] freesurfer installation issues on debian Misty
  • Re: [Freesurfer] freesurfer installation issues on debian fsbuild
• [Freesurfer] Doing predictive models on freesurfer outputs Yunus Soleymani
• [Freesurfer] preparing config file to run Tracula Barletta, Valeria
• [Freesurfer] How Can I Track Coordinates from NIfTI Raw Files 권용현
  • Re: [Freesurfer] How Can I Track Coordinates from NIfTI Raw Files Douglas N. Greve
• [Freesurfer] Feature associations between recon-all and synthseg Banerjee, Tania
  • Re: [Freesurfer] Feature associations between recon-all and synthseg Fischl, Bruce R.,PHD
• [Freesurfer] Fw: Welcome to the "Freesurfer" mailing list (Digest mode) 黄月虹
• [Freesurfer] mri_convert: Command not found Katherine Sawyer
• [Freesurfer] Extracting just the eTIV from stats file. Zeng, Victor (BIDMC - Keshavan - Psychiatry)
  • Re: [Freesurfer] Extracting just the eTIV from stats file. Douglas N. Greve
• [Freesurfer] obtain vertex neighborhood Jiaen Liu
  • Re: [Freesurfer] obtain vertex neighborhood Douglas N. Greve
  • Re: [Freesurfer] obtain vertex neighborhood Jiaen Liu
• [Freesurfer] amygdala nuclei from segmentHA_T1 registration issue Stephanie Williams
• [Freesurfer] Issues with hippocampal segmentation code (segmentHA_T2) and missing ConcatenateSubregionsResults in 7.3.1 Chumin, Evgeny Jenya
• [Freesurfer] Single voxel grey-white matter boundary binary mask Tamir Eisenstein
  • Re: [Freesurfer] Single voxel grey-white matter boundary binary mask Douglas N. Greve
  • Re: [Freesurfer] Single voxel grey-white matter boundary binary mask Fischl, Bruce R.,PHD
• [Freesurfer] FreeSurfer Labels Question Barsotti, Ercole
  • Re: [Freesurfer] FreeSurfer Labels Question Fischl, Bruce R.,PHD
  • Re: [Freesurfer] [External] Re: FreeSurfer Labels Question Barsotti, Ercole
• [Freesurfer] Importing surface meshes from 3rd party cortical surface reconstruction tools for analysis in fsaverage template space James Hengenius
• [Freesurfer] synthmorph for functional registration? Josh
  • Re: [Freesurfer] synthmorph for functional registration? Hoffmann, Malte,PhD
  • Re: [Freesurfer] synthmorph for functional registration? Fischl, Bruce R.,PHD
• [Freesurfer] Spiky Brains Bos, M.G.N. (Marieke)
  • Re: [Freesurfer] Spiky Brains Douglas N. Greve
  • Re: [Freesurfer] Spiky Brains Bos, M.G.N. (Marieke)
• [Freesurfer] needed: tools to work with synthmorph deformations in ANTS and FSL pipelines. Josh
  • Re: [Freesurfer] needed: tools to work with synthmorph deformations in ANTS and FSL pipelines. Hoffmann, Malte,PhD
  • Re: [Freesurfer] needed: tools to work with synthmorph deformations in ANTS and FSL pipelines. Josh
  • Re: [Freesurfer] needed: tools to work with synthmorph deformations in ANTS and FSL pipelines. Hoffmann, Malte,PhD
• [Freesurfer] Freesurfer v8.0.0 error 潘晨盛
  • Re: [Freesurfer] Freesurfer v8.0.0 error Huang, Yujing
  • Re: [Freesurfer] Freesurfer v8.0.0 error Douglas N. Greve
• [Freesurfer] recon-all-clinical rh.BA_exvivio.annot error Melissa Marie Rundle
  • Re: [Freesurfer] recon-all-clinical rh.BA_exvivio.annot error Melissa Marie Rundle
  • Re: [Freesurfer] recon-all-clinical rh.BA_exvivio.annot error Huang, Yujing
  • Re: [Freesurfer] recon-all-clinical rh.BA_exvivio.annot error Huang, Yujing
• Re: [Freesurfer] Petsurfer: PET -> MNI305 problem Douglas N. Greve
• Re: [Freesurfer] Error in longitudinal hippocampal fields Mark Wagshul
• Re: [Freesurfer] recon-all on poor MRI quality Douglas N. Greve
• Re: [Freesurfer] Error in longitudinal hippocampal fields processing Iglesias Gonzalez, Juan E.
• [Freesurfer] TRACULA error /bin/tcsh: bad interpreter: No such file or directory Barletta, Valeria
  • Re: [Freesurfer] TRACULA error /bin/tcsh: bad interpreter: No such file or directory fsbuild
• [Freesurfer] Subject: query about mri_vol2surf Pandey, Shraddha
  • Re: [Freesurfer] Subject: query about mri_vol2surf Douglas N. Greve
  • Re: [Freesurfer] [External] Re: Subject: query about mri_vol2surf Pandey, Shraddha
  • Re: [Freesurfer] [External] Re: Subject: query about mri_vol2surf Douglas N. Greve
• [Freesurfer] LME matrix design Bondi, Daniel
  • Re: [Freesurfer] Fwd: LME matrix design Diers, Kersten /DZNE
• [Freesurfer] Questions about CVS registration Tanxin Dong
  • Re: [Freesurfer] Questions about CVS registration Douglas N. Greve
• [Freesurfer] Recon all across different image dimensions of different clinical subjects! JM
  • Re: [Freesurfer] Recon all across different image dimensions of different clinical subjects! Douglas N. Greve
• [Freesurfer] TRACULA exited with ERROR /home/vbarletta/ants-2.5.4/bin/antsRegistrationSyNQuick.sh: Permission denied. Barletta, Valeria
  • Re: [Freesurfer] TRACULA exited with ERROR /home/vbarletta/ants-2.5.4/bin/antsRegistrationSyNQuick.sh: Permission denied. fsbuild
• [Freesurfer] errore with tracula: eddy_openmp: Command not found. Barletta, Valeria
• [Freesurfer] surfreg error: typo in mris_convert command Suzanne Witt
  • Re: [Freesurfer] surfreg error: typo in mris_convert command Huang, Yujing
• [Freesurfer] trac-all -prep EDDY Unrealistic read-out time ADRIANA LUCIA RUIZ RIZZO
• [Freesurfer] Take screenshot via sbatch without launching GUI Blujus, Jenna
  • Re: [Freesurfer] Take screenshot via sbatch without launching GUI Douglas N. Greve
• [Freesurfer] unsubscrube Daria Sharapova
• Re: [Freesurfer] recon-all command stuck before creating pial files fsbuild
• [Freesurfer] Fwd: recon-all command stuck before creating pial files chemda wiener
  • Re: [Freesurfer] Fwd: recon-all command stuck before creating pial files Fischl, Bruce R.,PHD
  • Re: [Freesurfer] Fwd: recon-all command stuck before creating pial files chemda wiener
  • Re: [Freesurfer] Fwd: recon-all command stuck before creating pial files Fischl, Bruce R.,PHD
• [Freesurfer] Merging aparc+aseg and ThalamicNuclei Andrew M
  • Re: [Freesurfer] Merging aparc+aseg and ThalamicNuclei Douglas N. Greve
• [Freesurfer] Pipeline for Transferring VBM Outputs to FreeSurfer and Parcellating with the Destrieux Atlas Safari, Nooshin (rvz7wf)
  • Re: [Freesurfer] Pipeline for Transferring VBM Outputs to FreeSurfer and Parcellating with the Destrieux Atlas Douglas N. Greve
• [Freesurfer] FDG Pet: How do I create an 'SUVR Image'? Lai, Ian M.
  • Re: [Freesurfer] FDG Pet: How do I create an 'SUVR Image'? Douglas N. Greve
• [Freesurfer] Recon-all failing Mark Wagshul
  • Re: [Freesurfer] Recon-all failing Douglas N. Greve
• [Freesurfer] Questions on Using recon-all-clinical for Cortical Thickness Analysis 王又劼
  • Re: [Freesurfer] Questions on Using recon-all-clinical for Cortical Thickness Analysis Gopinath, Karthik
• [Freesurfer] mri_coreg threads parallel processing clarification Hemond, Christopher
  • Re: [Freesurfer] mri_coreg threads parallel processing clarification Douglas N. Greve
  • Re: [Freesurfer] mri_coreg threads parallel processing clarification Hemond, Christopher
  • Re: [Freesurfer] mri_coreg threads parallel processing clarification Hemond, Christopher
• [Freesurfer] update from 7.1 to 7.4 Eszter Boros
  • Re: [Freesurfer] update from 7.1 to 7.4 Douglas N. Greve
• [Freesurfer] Question About Longitudinal TRACULA Analysis De Giorgi, Sara
• [Freesurfer] Longitudinal processing including infant data Hendrikse, Chanelle [cbuc...@sun.ac.za]
• [Freesurfer] Longitudinal FS Processing Yingling, Michael
  • Re: [Freesurfer] Longitudinal FS Processing Wighton, Paul
• Re: [Freesurfer] mri_coreg error: could not open brainmask.mgz file to register PET image with anatomical Douglas N. Greve
• [Freesurfer] Synthmorph Deformations -Separating Components of Transforms Josh Lee
• [Freesurfer] Freesurfer tutorial troubles Marcin Stański
  • Re: [Freesurfer] Freesurfer tutorial troubles fsbuild
• [Freesurfer] Help with mri_vol2surf incorrect surface generation Pandey, Shraddha
  • Re: [Freesurfer] Help with mri_vol2surf incorrect surface generation Douglas N. Greve
• [Freesurfer] How to interpret the vertex-wise area metric? Alex
  • [Freesurfer] 回复：How to interpret the vertex-wise area metric? Alex
  • [Freesurfer] RE: 回复：How to interpret the vertex-wise area metric? Fischl, Bruce R.,PHD
• [Freesurfer] FS 8-beta bug report Douglas N. Greve
• [Freesurfer] Systematic difference in volume between baseline and longitudinal pipelines Sandhitsu Das
• [Freesurfer] use and registration of FLAIR in recon-all and segmentHA Simone Cauzzo
  • Re: [Freesurfer] use and registration of FLAIR in recon-all and segmentHA (@Eugenio) Douglas N. Greve
  • Re: [Freesurfer] use and registration of FLAIR in recon-all and segmentHA Simone Cauzzo
• [Freesurfer] Appropriate image for texture/intensity based analysis Sandhitsu Das
  • Re: [Freesurfer] Appropriate image for texture/intensity based analysis Douglas N. Greve
  • Re: [Freesurfer] Appropriate image for texture/intensity based analysis Sandhitsu Das
• Re: [Freesurfer] mri_label2label fsbuild
  • Re: [Freesurfer] mri_label2label Douglas N. Greve
  • Re: [Freesurfer] mri_label2label 王又劼
• [Freesurfer] mri_vol2surf error: GM estimation couldn't find enough samples Lee, Hansol
  • Re: [Freesurfer] mri_vol2surf error: GM estimation couldn't find enough samples Douglas N. Greve
  • Re: [Freesurfer] mri_vol2surf error: GM estimation couldn't find enough samples Lee, Hansol
  • Re: [Freesurfer] mri_vol2surf error: GM estimation couldn't find enough samples Douglas N. Greve
• Re: [Freesurfer] mri_convert: Command terminated by signal 9 fsbuild
  • Re: [Freesurfer] mri_convert: Command terminated by signal 9 Jeffrey Neal
  • Re: [Freesurfer] mri_convert: Command terminated by signal 9 Huang, Yujing
  • Re: [Freesurfer] mri_convert: Command terminated by signal 9 Jeffrey Neal
  • Re: [Freesurfer] mri_convert: Command terminated by signal 9 fsbuild
• [Freesurfer] MD5 mismatch on one release ali rahimi
• [Freesurfer] NextBrain - CUDA out of memory error Boa Sorte Silva, Narlon
  • Re: [Freesurfer] NextBrain - CUDA out of memory error Iglesias Gonzalez, Juan E.

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