Okay, thanks!



On Mon, Sep 19, 2016 at 3:34 PM, Iglesias Gonzalez, Eugenio <
e.igles...@ucl.ac.uk> wrote:

> Hi Renate,
> as long as the additional scan is more or less aligned with the T1 in
> physical coordinates (i.e., they appear decently aligned when you open them
> in Freeview), you should be fine and not need to do anything.
> Cheers,
> /E
> Juan Eugenio Iglesias
> Senior Research Fellow
> Translational Imaging Group
> University College London
> http://www.jeiglesias.com
> http://cmictig.cs.ucl.ac.uk/
> On 19 Sep 2016, at 14:31, Vaz pandolfo, Renata <r...@njit.edu> wrote:
> Dear Eugenio,
> We have another question about the Hippo Sf Segmentation with an
> additional scan.
> Some of our additional scans (FLAIRs or T2s) have a bigger field of view
> as compared to the T1 (ex.: they cover more of the neck almost up to the
> shoulders of the subjects, while the T1 has the "normal" FoV).
> Should the additional scan be cropped or  preprocessed in any way (ex.:
> bias field correction)?  And if so, should we process the T1 in the same
> way or is it generally recommended to just use the raw images?
> Thank you!
> Renata
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