.mgz format made no difference. I see no option for "overlay" in freeview., I only get that option with tksurfer. The image is blank when loaded as a volume in freeview. It loads forever when I try to load it as a surface (I just get the 0-100% progress bar conintually loading with no end). If I try to load the rh.pial as a surface, then load the file as a volume overlay, it crashes freeview.
A few days back, Anna Crawford had a thread entitled "Volume to Surface" where she provided a pic of the inflated surface and the output of wmparc on the surface. If I try to run the exact same commands she did, I can't get any pics in freeview and it just crashes on me. FWIW, I'm running freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0. On 10/03/2016 04:08 PM, Trisanna Sprung-Much wrote: > I think it might have to do with the format of your output file - > perhaps try .mgz? This is what I used. > > Then open the surface and use the "overlay" option to overlay your ROI > as a surface overlay. ________________________________ Notice: This UI Health Care e-mail (including attachments) is covered by the Electronic Communications Privacy Act, 18 U.S.C. 2510-2521 and is intended only for the use of the individual or entity to which it is addressed, and may contain information that is privileged, confidential, and exempt from disclosure under applicable law. If you are not the intended recipient, any dissemination, distribution or copying of this communication is strictly prohibited. If you have received this communication in error, please notify the sender immediately and delete or destroy all copies of the original message and attachments thereto. Email sent to or from UI Health Care may be retained as required by law or regulation. Thank you. ________________________________ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
