Hi again. I think I can obtain fdr maps by: mri_surfcluster --in sig.mgh --subject fsaverage --hemi lh --annot aparc --sign pos --o fdr_005_lh_pos.mgh --fdr 0.05 --cortex --mask mask.mgh
Can anyone comment if the above command is right to generate a clusterwise fdr corrected p<0.05? Thanks Regards MV On Fri, Oct 7, 2016 at 1:11 PM, neuroimage analyst < neuroimage.anal...@gmail.com> wrote: > Hi, > > I was wondering if there is a way to perform fdr correction using command > line in freesurfer without using matlab as mri_glmfit-sim only does > bonferroni ? > > Thanks > Regards > MV >
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