hmmm, that looks ok, but it's hard to tell with all the backslashes and blank lines and such. Can you send the full command on a single line (e.g. by hitting up-arrow in the terminal window) and the actual output of freeview?


On Wed, 9 Aug 2017, Z Hessam wrote:


Hello Freesurfer Developers,

I have problem when I use "freeview" example code in terminal,
freeview -v \

    bert/mri/T1.mgz \

    bert/mri/wm.mgz \

    bert/mri/brainmask.mgz \

   
    bert/mri/aseg.mgz:colormap=lut:opacity=0.2 \

    -f \

    bert/surf/lh.white:edgecolor=blue \

    bert/surf/lh.pial:edgecolor=red \

    bert/surf/rh.white:edgecolor=blue \

    bert/surf/rh.pial:edgecolor=red
it tell "Failed to load MRI <subject_dir>",
mri_read(): couldn't determine type of file <subject_dir>
MRIread failed: Unable to read from <subject_dir> mri_read(): couldn't determine type of file <subject_dir>
but i can load wm.mgz and other existed files in GUI.

please help me to know why this error happend? and what should I do to solve
 this?

I've searched the list, I found a similar errors, but wasn't helpful answer reported.
help me please

regards

On Wed, Aug 9, 2017 at 7:56 PM, Z Hessam <z.hes...@gmail.com> wrote:

Hello Freesurfer Developers,

I have problem when I use "freeview" example code in terminal,
freeview
-v \

    bert/mri/T1.mgz \

    bert/mri/wm.mgz \

    bert/mri/brainmask.mgz \

   
bert/mri/aseg.mgz:colormap=lut:opacity=0.2 \

    -f \

    bert/surf/lh.white:edgecolor=blue \

    bert/surf/lh.pial:edgecolor=red \

    bert/surf/rh.white:edgecolor=blue \

    bert/surf/rh.pial:edgecolor=red
it tell "Failed to load MRI <subject_dir>", but i can load wm.mgz and other existed files in GUI.

please help me to know why this error happend? and what should I do to solve
 this?

I've searched the list, I found a similar errors, but wasn't helpful answer reported.
help me please

regards



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