Yes, that is the correct command line

On 2/9/18 9:16 AM, Avideh Gharehgazlou wrote:

Hi Freesurfer experts,

I found the answer to my previous question on FreeSurfer Wiki regarding pre-smoothing command line for LGI ( I am interested in looking at between-group differences in vertwex-wise LGI values).

I am now aware that the following command line must be used:

recon-all -s <subjid> -qcache -measure pial_lgi

However, if I also want to look at surface area differences between groups later on, is using the above pre-smoothing command line correct? OR do I have to use the following command line considering that I Am not only looking at LGI values : recon-all -s <subjid> -qcache

Would really appreciate your advice,



CONFIDENTIALITY NOTICE: This e-mail message, including any attachments, is for the sole use of the intended recipient(s) and may contain confidential and privileged information. Any unauthorized review, use, disclosure or distribution is prohibited. If you are not the intended recipient, please contact the sender by reply e-mail and destroy all copies of the original message.

AVIS DE CONFIDENTIALITÉ : Ce message électronique, ainsi que tout fichier qui y est joint, est reserve à l'usage exclusif du destinataire visé et peut contenir des renseignements confidentiels et privilégiés. Toute lecture, utilisation, divulgation ou distribution non autorisée est interdite. Si vous n'êtes pas le destinataire visé, veuillez en aviser l'expéditeur par retour de courriel et détruire toutes les copies du message original.

Freesurfer mailing list

Freesurfer mailing list

The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to