Hi Shim Hee

we need to know what commands you ran, the full screen output from them, and what version of FS you are using (at least!)


On Mon, 19 Feb 2018, Shim Hee Youn wrote:

Hi Freesurfer team,

I am currently using ADNI dataset to run Freesurfer  Recon all for MPRAGE, SPGR 
and SPGR accelerated

For SPGR sequences (including SPGR accelerated), I have ran recon all with 
FLAIR images as I thought
it would improve the output; however, it seems to aggravate the output. Any 
ideas on know why this
is the case?

I have attached the images in this email.

Hope to hear from you soon. Thank you!

Best Regards,

Shim Hee Youn

Research Assistant

Multimodal Neuroimaging in Neuropsychiatric Disorders Laboratory | Center for 
Cognitive Neuroscience

Neuroscience and Behavioral Disorders Program | Duke-NUS Medical School, 

Address: 8 College Road, #06-15, Singapore 169857  

Tel: (65) 6516 4339 or (65) 6516 7590  Fax: (65) 6221 8685  Email: 

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