Hi Katie, 

yes, you should check the base (subject-template) if further editing is 
necessary there, so that surfaces look good on the base.
Best, Martin

> On 4. Apr 2018, at 15:54, Mckay, Katie Geraldine <kmck...@email.unc.edu> 
> wrote:
> 
> Hi,
> I have a question regarding the longitudinal processing stream in FreeSurfer, 
> is it possible to use the processing stream if both baseline and endline data 
> have already been edited with control points? 
> Thanks! 
> Katie McKay
> 
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