Yes, use the SAVE REG button. You should be able to see that it has changed.
On 11/13/2018 12:22 PM, Gamaliz wrote: > > External Email - Use Caution > > Once I manually fix the registration how do I save it? I know there is > SAVE REG. Will this overwrite the previous file automatically? > > On Tue, Nov 13, 2018 at 12:13 PM Greve, Douglas N.,Ph.D. > <dgr...@mgh.harvard.edu <mailto:dgr...@mgh.harvard.edu>> wrote: > > Just run > recon-all -s subject -segstats > and the new ICV should appear in the aseg.stats file > > On 11/13/2018 12:08 PM, Gamaliz wrote: > > > > External Email - Use Caution > > > > > > I have a fewT1 scans that have obvious incorrect registration > > to mni_average_305. I opened tkregister2 --s subjid --fstal --surfs > > and I am able to fix the registration, but I wonder how to use > the ew > > registration to recalculate the new ICV. I am interested in > doing it > > with Freesurfer (as I know I could get the matrix and calculate the > > determinant. I guess I will have to save the transform and rerun > some > > of Freesurfer command to overwrite the old icv value? > > > > > > Thanks > > > > > > Gabriel > > > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > -- > gAbE > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
