If you want to use the --cache-in option, you need to have run recon-all with the -qcache option. If you take away the -cache-in option, then mris_preproc should run correctly
On 11/28/2018 12:45 PM, Larissa Bechtle wrote: > > External Email - Use Caution > > Hi everyone, > thank you very much for answering! > Originally I created the FSGD File with excel, saved it as a tab > delimited text file and used the tr-command afterwards (tr ’\r’ ’\n’ < > FSGD_2.fsgd.txt > FSGD_2.fsgd). > After having read your message I recreated the FSGD-File with TextEdit > instead. Now it is > [kpsy-mac84024:~/Desktop/Larissa/Gewalt] Forschung% mris_preproc > --fsgd FSGD.fsgd --cache-in thickness.fwhm10.fsaverage --target > fsaverage --hemi lh --out lh.gewalt.10.mgh > nsubjects = 46 > ERROR: cannot find > /Users/Forschung/Desktop/Larissa/Gewalt//xp09/surf/lh.thickness.fwhm10.fsaverage.mgh > I send you the actual fsgd-File an an attachement and would be very > thankful for some advice > Best, > Larissa > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
