not unless you also have an image of the whole brain. Even then I'm not sure it will do what you want, although I'm still not clear on exactly what you are doing. Registering one image of the skull to a model? Why?

On Fri, 21 Jun 2019, Shrabani Ghosh wrote:


        External Email - Use Caution        

These are skull images of axial representation. Can't I use freesurfer? Because 
here interpolation
is important. 

On Fri, Jun 21, 2019 at 11:58 AM Bruce Fischl <fis...@nmr.mgh.harvard.edu> 
wrote:
      Hi Shrabani

      I'm not even sure what these are images of. If you are looking for
      general-purpose registration tools you can try ANTS or something like 
that.

      cheers
      Bruce


      On Fri, 21 Jun 2019, Shrabani
      Ghosh wrote:

      >
      >         External Email - Use Caution        
      >
      > The fixed volume is my model volume and the other is a patient volume 
(moving )that I
      want to fit
      > and to the fixed volume. They are different in size and they have to be 
perfectly
      aligned. Please
      > guide me on how to do the registration. 8.png is the model volume. 
      > 9.png is the patient volume. 
      > 10.png is the outline of their size. the smaller one is the moving 
image and the
      bigger one is the
      > fixed image. 
      >
      > On Fri, Jun 21, 2019 at 10:22 AM Bruce Fischl 
<fis...@nmr.mgh.harvard.edu> wrote:
      >       what kinds of volumes are they and why are you registering them?
      >       cheers
      >       Bruce
      >       On Thu, 20
      >       Jun 2019, Shrabani Ghosh wrote:
      >
      >       >
      >       >         External Email - Use Caution        
      >       >
      >       > Hi freesurfer,
      >       > I want to do registration on two image volumes nifti file. What 
are the
      commands I
      >       have to use to do
      >       > the registration?
      >       >
      >       > Shrabani Ghosh
      >       >
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