oh I see. I thought you meant the file format was not binary. Hmmm, not sure. Maybe Doug will have some insight, as I didn't think surf2surf would binarize by default
Bruce
On Fri, 13 Sep 2019, Matthieu VANHOUTTE wrote:


        External Email - Use Caution        

Hi Bruce,

The input file has not only binary values (0 or 1) it is made of float
values, whereas the output mri_surf2surf contains only binary values.

Best,

Matthieu

On 13/09/2019 15:52, Bruce Fischl wrote:
      Hi Matthieu

      sorry, I don't understand. All the files are binary, no? Are you
      getting an error?

      cheers
      Bruce
      On Fri, 13 Sep 2019, Matthieu VANHOUTTE wrote:

                  External Email - Use Caution Dear FS's
            experts,

            I am trying to downsample some surface data from
            fsaverage to fsaverage6 with the following command:

             mri_surf2surf --hemi lh --srcsubject fsaverage
            --sval ./lh.fsaverage.s8mm.mgh  --trgsubject
            fsaverage6 --tval ./lh.fsaverage6.s8mm.mgh --cortex

            However, the output surface data is a binary file
            contrary to the source one (please see attached).

            Would anyone have an idea of the problem?

            Best,

            Matthieu




_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Reply via email to