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Hey all,

I have a group of subjects with 2 time points that I've run thru the 
longitudinal processing stream. All goes OK until I run the recon-all -long and 
the resulting .long. subject dirs have the finalsurfs misaligned (i.e. one 
subject has the edits moved inferior and the other has them moved superior, 
causing drastic consequences to the pial/wm surfaces).

FYI these subjects were processed on a Linux-based high performance computing 
cluster and edits were made locally on a Linux virtual machine with subject 
dirs being transferred back and forth via scp. Not sure if this is relevant, 
but thought I'd mention it just in case.

I've uploaded a .tar file containing one of these longitudinal subject's 
directories (i.e. both cross tps, base, and both resulting long tps) called 
'merkitch_upload_201980913.tar' via the filedrop website.

Any help would be appreciated!



Douglas Merkitch
Clinical Research Coordinator

355 E. Erie St, Chicago, IL 60611
312-238-5911 office


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