External Email - Use Caution
Hello,
thanks for your answer. Please see attached the screenshot.
I typed "$ which freeview.bin" --> the output:
"/usr/local/freesurfer/bin/freeview.bin"
I typed "$ ldd `which freeview.bin` | grep not" --> the output: 20 files
"libvtk...so.5.6 are not found" Please see the attached screenshot.
While trying to install the packages (eg. "sudo apt-get install
libvtkverdict.so.5.6"), the output is:
Reading package lists... Done
Building dependency tree
Reading state information... Done
E: Unable to locate package libvtkverdict.so.5.6
E: Couldn't find any package by glob 'libvtkverdict.so.5.6'
E: Couldn't find any package by regex 'libvtkverdict.so.5.6'
What´s wrong? Please, could you advise me? I tried to run freeview on Ubuntu
16.04 and 18.04 as well but the problem still remains the same.
Thanks a lot for your help
Regards
Adam
________________________________
Od: fsbuild <fsbu...@contbay.com>
Odesláno: pondělí 21. října 2019 4:28
Komu: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Kopie: adam.ryt...@outlook.cz <adam.ryt...@outlook.cz>
Předmět: Re: [Freesurfer] can´t open an image in Freeview
Hello Adam,
Please check if you have a “freeview.bin” program.
$ which freeview.bin
If you get a path back with freeview.bin in it, e.g. something like
/usr/local/freesurfer/bin/freeview.bin
- then try the ldd command on freeview.bin,
$ ldd `which freeview.bin` | grep not
- then see if it lists that something is not found.
- R.
On Oct 19, 2019, at 03:27, Adam Rytina <adam.ryt...@outlook.cz> wrote:
External Email - Use Caution
Hello,
I run the command "$ ldd `which freeview` | grep not" and the result is "not a
dynamic executable". Do you know where the problem is?
What I read there could be the problem regarding 32bit or 64bit system I´m
working on. I am running on Windows 10 64bit, 64 bit CPU, 64bit Ubuntu 16.04. I
downloaded the 6.0.0. Freesurfer version from the official
page:https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall
Please, could you help me?
Thanks a lot
Adam
________________________________
Od: fsbuild <fsbu...@contbay.com<mailto:fsbu...@contbay.com>>
Odesláno: pátek 18.. října 2019 22:05
Komu: freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>
<freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>>
Kopie: adam.ryt...@outlook.cz<mailto:adam.ryt...@outlook.cz>
<adam.ryt...@outlook.cz<mailto:adam.ryt...@outlook.cz>>
Předmět: Re: [Freesurfer] can´t open an image in Freeview
Hello Adam,
See if you can run the following command, and if it reports anything is not
found (you can cut and paste the command)
- R.
$ ldd `which freeview` | grep not
Adam Rytina<mailto:adam.ryt...@outlook.cz>
October 18, 2019 at 14:31
External Email - Use Caution
Hello all,
I´m new to Freesurfer and I´m struggling with loading an image in FreeView. I
am running the Freesurfer 6.0.0. on Ubuntu 16.04. Virtual Machine. While
opening FreeView (typing "freeview" in the shell) just some empty grey windows
will pop out (please see attached the screenshot). Besides this, everything is
OK, I successfully tested Freesurfer installation. I haven´t found any simmilar
issue on the Internet. Thus, please, could you help me to address this issue?
Thanks a lot
Adam
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