Hi Dalton
you need to give us a lot more information. What command did you run?
What was the full output?
cheers
Bruce
On Wed, 13 Nov 2019, Dalton Bermudez wrote:
External Email - Use Caution
---------- Forwarded message ---------
From: Dalton Bermudez <daltonhbermu...@gmail.com>
Date: Wed, Nov 13, 2019 at 1:54 PM
Subject: recon-all error: ltMNIreadEx: could not open file
transforms/talairach.xfm
To: <freesurfer@nmr.mgh.harvard.edu>
Dear FreeSurfer Developers,
I am attempting to obtain a average cortical surface for two structural MRI nii
dataset. However,
when I run the command, I obtain the following errors.
error: No such file or directory
error: ltMNIreadEx: could not open file transforms/talairach.xfm
error: mghRead(/home/dbermudez/Documents/subjects/00_0086/mri/orig.mgz, -1):
could not open file
ERROR readMNI: cannot read src MRIorig.mgz
FreeSurfer version: freesurfer-linux-centos6_x86_64-dev
Platform: Linux Ubuntu 18.05
recon-all.log: see attachment
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