External Email - Use Caution        

Yes, it works!.

Thank you so much.

El vie., 14 feb. 2020 a las 17:22, Douglas N. Greve (<dgr...@mgh.harvard.edu>)
escribió:

> You can try,
> mri_convert --in_orientation PIR t1_flip.nii t1_flip_flip.nii
> but I'm not promising anything
>
> On 2/14/2020 11:03 AM, Miguel Ángel Rivas Fernández wrote:
>
>         External Email - Use Caution
> Dear Douglas,
>
> My image is in the correct orientation. The reason is that am using a
> software to detect brain lesions that only works in left hemisphere and my
> subject have the lesion in the right hemisphere. I tried it with the
> following command and it works
>
> mri_convert --in_orientation PIL t1.nii t1_flip.nii
>
> Now I would like to come back to the original orientation, which command
> should I use?
>
> Thanks in advance.
>
> Best regards,
>
> El vie., 14 feb. 2020 a las 16:01, Douglas N. Greve (<
> dgr...@mgh.harvard.edu>) escribió:
>
>> Is the image in the wrong orientation (ie, is it not truly in PIR) or do
>> you want to change the orientation? doing a left-right swap is more than
>> changing the orientation
>>
>> On 2/11/2020 4:06 PM, Miguel Ángel Rivas Fernández wrote:
>>
>>         External Email - Use Caution
>> Dear Freesurfer experts,
>>
>> Which command should I use to flip the left-right orientation of a T1
>> image?. Actually my image is in PIR orientation, I used the following
>> command
>>
>> mri_info --orientation '/home/rmn/Desktop/study/E03/3d/coanat_E03.nii'
>>
>> *PIR*
>>
>>
>> Thanks in advance,
>>
>> Best regards,
>>
>> --
>> *Miguel Ángel Rivas Fernández*
>>
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>
>
> --
> *Miguel Ángel Rivas Fernández*
>
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> Freesurfer mailing 
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-- 
*Miguel Ángel Rivas Fernández*
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