sorry, I'm not sure I understand. bbregister will let you register a T2 to the T1 of the same subject, is that what you want?

cheers
Bruce
On Sun, 17 May 2020, Amar Shukla wrote:


        External Email - Use Caution        

Dear Sir,
thank you, Sir, for your valuable advice,

Can I register all the t2 types file with a Structural template,
cross-registration we can do or not?



On Mon, May 11, 2020 at 11:04 PM Douglas N. Greve <dgr...@mgh.harvard.edu>
wrote:
      It is probably more up-to-date to run
      bbregister --help

      On 5/9/2020 1:10 PM, Bruce Fischl wrote:
      https://surfer.nmr.mgh.harvard.edu/fswiki/bbregister
      On Sat, 9 May 2020, Amar Shukla wrote:


                    External Email - Use Caution        

            Dear Sir,
            Thank you for valuable information, do we have
            any link or resource to get
            through this tool.

            regards
            Amar Shukla

            On Sat, May 9, 2020 at 10:31 PM Bruce Fischl
            <fis...@nmr.mgh.harvard.edu>
            wrote:
                  Hi Amar

                  no restriction - all of those should be
            registerable using
                  Doug's
                  excellent bbregister tool

                  cheers
                  Bruce
                  On Sat, 9 May 2020, Amar Shukla wrote:

                  >
                  >         External Email - Use
            Caution        
                  >
                  > Dear SirDo we have restriction in the
            registration with a
                  different format
                  > of data like DTI, sMRI, PET and many
            more or we can go for
                  registration in
                  > any combination in FREE Surfer.
                  >
                  > regards
                  > Amar Shukla
                  >
                  > On Mon, Apr 13, 2020 at 8:14 PM Amar
            Shukla
                  <amar28071...@gmail.com> wrote:
                  >       Thank you so much sir
                  >
                  > On Mon, 13 Apr 2020, 19:56 Bruce
            Fischl,
                  <fis...@nmr.mgh.harvard.edu>
                  > wrote:
                  >       yes, that should be doable if
            you process in the order I
                  >       suggested below
                  >       cheers
                  >       Bruce
                  >       On
                  >       Mon, 13 Apr 2020, Amar Shukla
            wrote:
                  >
                  >       >
                  >       >         External Email - Use
            Caution        
                  >       >
                  >       > Dear Sir,
                  >       >
                  >       > Thank you for your precious
            reply  
                  >       >
                  >       > Actually i am working on to
            the study of Disease which
                  >       have the effect on
                  >       > the brain.
                  >       >
                  >       > 1) First i am using t1 image
            for analysis of the same
                  >       subject of that
                  >       > disease.
                  >       >
                  >       > 2) I am using Diffussion image
            for the analysis  for
                  the
                  >       same subject.
                  >       >
                  >       > So can i make any relation
            between trac based analysis
                  >       of diffusion image
                  >       > and Volumetric analysis of T1
            weighted image of same
                  >       subject.
                  >       >
                  >       > regards
                  >       > Amar Shukla
                  >       >
                  >       >
                  >       > On Mon, 13 Apr 2020, 19:09
            Bruce Fischl,
                  >       <fis...@nmr.mgh.harvard.edu>
            wrote:
                  >       >       Hi Amar
                  >       >
                  >       >       I'm not quite sure I
            understand your question,
                  but
                  >       in FS you
                  >       >       would use
                  >       >       the T1 as input to
            recon-all, then the outputs
                  of
                  >       that and the
                  >       >       diffusion
                  >       >       data would let you run
            tracula
                  >       >
                  >       >       cheers
                  >       >       Bruce
                  >       >       On Mon, 13 Apr 2020,
            Amar Shukla wrote:
                  >       >
                  >       >       >
                  >       >       >         External Email
            - Use Caution        
                  >       >       >
                  >       >       > Hello Freesurfer,
                  >       >       >
                  >       >       > Can we go through the
            volumetric  [surface
                  area
                  >       and many more
                  >       >       ] through DTI
                  >       >       > images and  T1 or t2
            weighted images of the
                  same
                  >       subject. Can
                  >       >       we provide
                  >       >       > common study and can
            we develop any analysis
                  on
                  >       these studies.
                  >       >       > My research is focused
            on these direction o or
                  >       any kind of
                  >       >       corelation
                  >       >       > through different
            Images .
                  >       >       > basis of diffusion
            images and  T1 or t2
                  weighted
                  >       images,
                  >       >       >
                  >       >       > so please give
            suggestions and comment on
                  these.
                  >       >       >
                  >       >       >
                  >       >       >
                  >       >       > --
                  >       >       > With Regards,
                  >       >       > Amar Shukla
                  >       >       >
                  >       >       >
                  >       >     
             >_______________________________________________
                  >       >       Freesurfer mailing list
                  >       >     
             Freesurfer@nmr.mgh.harvard.edu
                  >       >     
                  >     
                 
              https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
                  >       >
                  >       >
                  >     
             >_______________________________________________
                  >       Freesurfer mailing list
                  >       Freesurfer@nmr.mgh.harvard.edu
                  >     
                 
             https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
                  >
                  >
                  >
                  > --
                  > With Regards,
                  > Amar Shukla
                  > Assistant Professor, 
                  > M tech AI ANN(2014-2016),
                  > Centre Of Information Technology,
                  > UPES 
                  > Contact :+91 897 977 8016
                  >
                 
            >_______________________________________________
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                  Freesurfer@nmr.mgh.harvard.edu
                 
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            --
            With Regards,
            Amar Shukla
            Assistant Professor, 
            M tech AI ANN(2014-2016),
            Centre Of Information Technology,
            UPES 
            Contact :+91 897 977 8016



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_______________________________________________
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--
With Regards,
Amar Shukla
Assistant Professor, 
M tech AI ANN(2014-2016),
Centre Of Information Technology,
UPES 
Contact :+91 897 977 8016

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