External Email - Use Caution
Hi，
I used command: recon-all -s subject1 -i subject1.nii -all -sd
/home/t1. I think it is FrreSurfer default method to segementation.
Lejia
At 2024-02-27 01:24:00, "Douglas N. Greve" <dgr...@mgh.harvard.edu> wrote:
what did you use the do the segmentation? Include command line and terminal
output
On 2/26/2024 10:46 AM, lejia2011411409 wrote:
External Email - Use Caution
Dear freesurfer experts,
A large amount of subjects got segmentation white matter bad (some dark white
matter cannot be recognition below 57 slices). Attachment show this problem.
I used 'kvlEMSegment brainmask.mgz 3 4 4 ' to segment white matter again.
while there reported kvlEMSegment: command not found. Do you have any
solutions for this? Thanks in advance.
Best wishes,
Lejia
_______________________________________________
Freesurfer mailing list
freesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Mass General Brigham
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted). If you do not wish to
continue communication over unencrypted e-mail, please notify the sender of
this message immediately. Continuing to send or respond to e-mail after
receiving this message means you understand and accept this risk and wish to
continue to communicate over unencrypted e-mail.
