Thanks to both of you for the suggestions. Leigh Fanning emitted this, circa 30/04/09 12:03 PM: > I was quite happy with this package for reading FASTA format: > > http://cbl.sourceforge.net/ > > This might be useful towards tree rendering: > > http://www.cs.unm.edu/~morin/sw.html
Marcus G. Daniels emitted this, circa 30/04/09 12:06 PM: > First you'll need to take your FASTA files get an alignment. Good > packages for that are mafft and Muscle. > > Then take your alignment infer your tree. To do that, one good > package is PhyML. > > http://atgc.lirmm.fr/phyml/ > > PhyML isn't strictly speaking open source, but it's free. > > To actually draw a picture, an easy to use package is FigTree > http://tree.bio.ed.ac.uk/software/figtree/ -- glen e. p. ropella, 971-222-9095, http://agent-based-modeling.com ============================================================ FRIAM Applied Complexity Group listserv Meets Fridays 9a-11:30 at cafe at St. John's College lectures, archives, unsubscribe, maps at http://www.friam.org
